New model in OGS2.0 | DPOGS211130  |
---|---|
Genomic Position | scaffold196:- 23824-24962 |
See gene structure | |
CDS Length | 1071 |
Paired RNAseq reads   | 12 |
Single RNAseq reads   | 132 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005792 (1e-17) |
Best Drosophila hit   | CG7200 (3e-65) |
Best Human hit | jmjC domain-containing protein 4 isoform 1 (1e-63) |
Best NR hit (blastp)   | GD21842 [Drosophila simulans] (8e-75) |
Best NR hit (blastx)   | PREDICTED: similar to jumonji domain containing 4 isoform 1 [Apis mellifera] (3e-75) |
GeneOntology terms    | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
InterPro families    | IPR003347 Transcription factor jumonji/aspartyl beta-hydroxylase IPR013129 Transcription factor jumonji |
Orthology group | MCL15417 |
Nucleotide sequence:
ATGTTACAAAATTTACCATGTATAATTAAAAATGTATCGAATACCTGGCAATGCTCAGTT
GATTGGATTAAGGAAGGTTCCATTAACTATGAGTATCTAGAACAACACTATGGAGATGTA
GTAGCTCCTGTTGCCGACTGCCAAGAAACCAATTTTAATTCTCATTGCAAAACTAATATG
AAAGTTGGTGATTATATAACTTATCTCAGAAACCCTTCCAAAGAAAAACTACTATATCTT
AAAGACTGGCATTTGAAAAGATTGAAAAGTGGTGAACATTTTTATGAAGTGCCACATATA
TTTGCTTCCGATTGGTTGAATGAATTTGCTATTGATCATGAGGATGATGATTTTATGTTC
GTTTATATTGGAGCTCAAAACACTTGGACTCCCTTGCACGCAGATGTTTATTCATCTTAC
AGTTGGTCAGTAAATGTAATCGGAAGGAAAAAATGGGTCCTGTTTCCTCCCGGAGAAGAA
GAAAAATTAAAGGATTCTCTAGGAAATCTACCTTTATTATTTAATGCGCATGAATTTAAT
AATGTAAGATACATAGAAGTTACACAAGAAAGAGGCGATGCAATTTTTGTTCCATCCGGA
TGGCACCACCAAGTTTGTAATGAGTTAGAAACTATATCAATTAATCATAATTTCGTAAAT
GCATGTAACATACATTTTGTATGGGAAGCATTGCAAAGAAATCTTATTTCTGTTGAAAAT
GAAATTAAGGAGTTCAGAGAAACTCCAGAATTTACTAGCCAGTGCCAACTTATACTGAAA
TCGCTGTTCGGCATGGATTTTGAAAGTTTCATAAATTTCATCACCTACATAGCCACTAAG
AGGTTAAGTTTAAGAAATAATAGACAGTATATAGTTTTTGATATGTATAATATTGGAAAA
AACCATATTGATAATGATTTATTAATCATATTTAAAATAATAAAATGTCTTTTAAACCAC
CCTCTAATACTAGACAGCCATTTACCACAGAACATAGCACCAACATTAATTAATATAAGA
GATCAAATAAGTGATATAATAATTAAAAAAAGTCCTGAAGCCAAGGCATAA
Protein sequence:
MLQNLPCIIKNVSNTWQCSVDWIKEGSINYEYLEQHYGDVVAPVADCQETNFNSHCKTNM
KVGDYITYLRNPSKEKLLYLKDWHLKRLKSGEHFYEVPHIFASDWLNEFAIDHEDDDFMF
VYIGAQNTWTPLHADVYSSYSWSVNVIGRKKWVLFPPGEEEKLKDSLGNLPLLFNAHEFN
NVRYIEVTQERGDAIFVPSGWHHQVCNELETISINHNFVNACNIHFVWEALQRNLISVEN
EIKEFRETPEFTSQCQLILKSLFGMDFESFINFITYIATKRLSLRNNRQYIVFDMYNIGK
NHIDNDLLIIFKIIKCLLNHPLILDSHLPQNIAPTLINIRDQISDIIIKKSPEAKA