New model in OGS2.0 | DPOGS211131  |
---|---|
Genomic Position | scaffold196:- 20068-21630 |
See gene structure | |
CDS Length | 1338 |
Paired RNAseq reads   | 2421 |
Single RNAseq reads   | 5843 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003006 (2e-08) |
Best Drosophila hit   | CG10555 (7e-17) |
Best Human hit | calcium-responsive transactivator (3e-22) |
Best NR hit (blastp)   | PREDICTED: similar to SSXT protein (Synovial sarcoma, translocated to X chromosome) (SYT protein) [Apis mellifera] (2e-29) |
Best NR hit (blastx)   | PREDICTED: similar to SSXT protein (Synovial sarcoma, translocated to X chromosome) (SYT protein) [Apis mellifera] (4e-29) |
GeneOntology terms    | GO:0016568 chromatin modification GO:0016358 dendrite development GO:0000780 condensed nuclear chromosome, centromeric region GO:0000777 condensed chromosome kinetochore GO:0016563 transcription activator activity GO:0005694 chromosome GO:0045449 regulation of transcription GO:0005634 nucleus |
InterPro families   | IPR007726 SSXT |
Orthology group | MCL30331 |
Nucleotide sequence:
ATGTCTGTTGCGTTCGCACCCCGGGGCAACCGGCCACCATTGAGTCCAGCACAAATTCAA
AAAATGCTGGATGAAAATGCACATTTGATACAAACAATTCAAGAATATCAAGCGAAAGGG
CAGCTTATGGAATGTCATCAATATCAGCAAGTTTTACACAGAAATTTAGTGTATTTAGCA
TCTGTCGCAGACGCCAATCAGAACATTCAAGCTTTACTCCCGCCACCTCACCAATTAGCT
GGTAATGTTCAGCAGGGATCCCTCAACCCTCCTACTAGCGGAGCTGATGTACCAGGATCA
CCACAACAACCATACCGTCCACCATCAGGAGTGTCTTCAACACCTACAAGACCGACACAA
TCATATGGTCAAAGACCTTACCCACAGAATCAATATCAAGGACAGTATCAAGGCTCACCA
GGCTATCCTCCCCAACCTGGTTATGGACCCCCTGGGCAAGGATATGGTCCACCCAACCCC
TCTCAACAACCACAAGGCTATCCACCCAATTCCACATATGGACCTCCTATAACCACATCA
AGTAATTATCCCCCCTCTACACACCCAAGTCCAGGATACCCACCCTCTTCTGGTCAGCAA
CCTTATGCTCCACCTCCTGGAAGCCCCGCAGCTGCAGGTTCACCATATCCAGTCAGAGGA
TCAAGCCAACCAGCATACACTGGAAATTCAGGTTACCCTCCACCTCAATCGGGACCGAAC
TATCCCAATGTGGGTGTGAGTTCTTACAATGCTACAACCTCCCAGCCCCAGCCGTATCAA
TCACAACCATTCCCTAATACTACTCCTACGTCAGCATATAGCTCAACACCAATCTCGCAA
CCGAACCGCTCTCCTCAACCACCACCATCTGGTTATACATCTCAAAATCCGACCAGCACT
GGTTATGGTTCTCCATCTGCACAGTCACCGACATATAACTCTAGTGCCCATGGAAATAAT
GGTCAAAGTTCAACACCATCCTCAGGAGGACCACCTCCAAGTGGTACCCCATCTGGTTCA
CAGTATCCTCCATCTAGTCAACCTCCATATCCTCCAGCAACACAACCCCCTTATTCTAAT
CCATCATCTCAGCCTGGTAGTCCATCACCATCAGTCTCAACAGCACCACCTCCTCAGTCT
TCATACCCACAGAATCCTCAAAATTATCCTCCTGGAGGAGGCGCATATCCTCCCCACGCC
TATCAACAAGGCTATCCTCCGGCCCAGTATCCCCCGTCTCCCTATCCATATGCTCGGGCC
CCAGCACCCGGTGCTCCTCCTCCAGGTGCGCCACAACCCTATCCAGGTTATGGATTCCAG
CCCCCTAATCAGCAGTAA
Protein sequence:
MSVAFAPRGNRPPLSPAQIQKMLDENAHLIQTIQEYQAKGQLMECHQYQQVLHRNLVYLA
SVADANQNIQALLPPPHQLAGNVQQGSLNPPTSGADVPGSPQQPYRPPSGVSSTPTRPTQ
SYGQRPYPQNQYQGQYQGSPGYPPQPGYGPPGQGYGPPNPSQQPQGYPPNSTYGPPITTS
SNYPPSTHPSPGYPPSSGQQPYAPPPGSPAAAGSPYPVRGSSQPAYTGNSGYPPPQSGPN
YPNVGVSSYNATTSQPQPYQSQPFPNTTPTSAYSSTPISQPNRSPQPPPSGYTSQNPTST
GYGSPSAQSPTYNSSAHGNNGQSSTPSSGGPPPSGTPSGSQYPPSSQPPYPPATQPPYSN
PSSQPGSPSPSVSTAPPPQSSYPQNPQNYPPGGGAYPPHAYQQGYPPAQYPPSPYPYARA
PAPGAPPPGAPQPYPGYGFQPPNQQ