New model in OGS2.0 | DPOGS211169  |
---|---|
Genomic Position | scaffold196:+ 17963-19123 |
See gene structure | |
CDS Length | 828 |
Paired RNAseq reads   | 149 |
Single RNAseq reads   | 496 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003155 (5e-101) |
Best Drosophila hit   | mitochondrial ribosomal protein L3 (9e-70) |
Best Human hit | 39S ribosomal protein L3, mitochondrial (1e-41) |
Best NR hit (blastp)   | Mitochondrial 39S ribosomal protein L3 [Aedes aegypti] (2e-86) |
Best NR hit (blastx)   | Mitochondrial 39S ribosomal protein L3 [Aedes aegypti] (6e-88) |
GeneOntology terms    | GO:0003735 structural constituent of ribosome GO:0005762 mitochondrial large ribosomal subunit GO:0006412 translation GO:0005763 mitochondrial small ribosomal subunit |
InterPro families    | IPR000597 Ribosomal protein L3 IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel |
Orthology group | MCL12858 |
Nucleotide sequence:
ATGGCATCATCTAACTTAAAACTCCTTTGCACATTATTAAGTAGGATTCGAGTCGAAAAT
GTGACAATAAAAAGGAATTTCTATCAACCACCGAAATATCGTCCACCGCATTGGTACATG
CCAAAGGAGAGAGTGTTGACTGATGATATGGTCACTCAAGACAATAAGGATTTCATTGAT
GAAGTAAGACAAGATAAATTAAATTTGCAAGCTGCAATGGAATCACCCCTTAGTAAAATT
GAATCCCAAGAAACCTTACAGTGGGACCCAACTACCAGAAGAGTTGGCTTAATAGCTCGT
AAGATTGGAAATTACCCATTGTGGACAAAAACTGGAAAAAAAGTGCAGACCACTTTGCTT
CAGGTGGTGGACAACCATGTCATAAAATACATACCCCCAGAAGAATACACACCTGCAAAA
GATTTTAAGCTCAAAAAAGTTGGAAAATATAAATTAGGATGTATGTTAGTGGGATCAGAA
ACCATAGACCCTACTACAGTTACTAAGGATTATTGTGGCATTTTTACTAGTGTGGGAATG
CTACCTAAAAGACATTTGTGTCGCTTCCATGTGTCACCAAGCGCACAACTGCCCACCGGC
ACACCTTTGTTTGCTACTCATTTTAGAGTTGGTGACTATTTAGATATAAGAGCCAAAACT
ATAGACCGAGGCTTCCAAGGAGTTATGAAGAGATGGGGATTTAAGGGCATGCCTGCTTCT
CATGGAGTAACTAAAACTCATAGAAGACCAGGAAATATTGGAGCTGGTGGTGAAAAAGCT
CGTGTATGGCCTGGAACTAAAATGCCAGGTCATATGGGCAACAGGTAA
Protein sequence:
MASSNLKLLCTLLSRIRVENVTIKRNFYQPPKYRPPHWYMPKERVLTDDMVTQDNKDFID
EVRQDKLNLQAAMESPLSKIESQETLQWDPTTRRVGLIARKIGNYPLWTKTGKKVQTTLL
QVVDNHVIKYIPPEEYTPAKDFKLKKVGKYKLGCMLVGSETIDPTTVTKDYCGIFTSVGM
LPKRHLCRFHVSPSAQLPTGTPLFATHFRVGDYLDIRAKTIDRGFQGVMKRWGFKGMPAS
HGVTKTHRRPGNIGAGGEKARVWPGTKMPGHMGNR