| New model in OGS2.0 | DPOGS211173 |
|---|---|
| Genomic Position | scaffold196:+ 44473-48953 |
| See gene structure | |
| CDS Length | 3672 |
| Paired RNAseq reads | 639 |
| Single RNAseq reads | 1630 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003159 (3e-56) |
| Best Drosophila hit | ariadne, isoform B (5e-07) |
| Best Human hit | ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform 2 (5e-61) |
| Best NR hit (blastp) | PREDICTED: similar to ubiquitin conjugating enzyme 7 interacting protein 3 isoform 2 [Apis mellifera] (7e-88) |
| Best NR hit (blastx) | AGAP009239-PA [Anopheles gambiae str. PEST] (5e-78) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005515 protein binding GO:0005622 intracellular GO:0046872 metal ion binding |
| InterPro families | IPR017907 Zinc finger, RING-type, conserved site IPR001841 Zinc finger, RING-type |
| Orthology group | MCL16679 |
Nucleotide sequence:
ATGAACGACGAAATTGAGGAGGAGGCACCTCGCCCCCGTCCCCTTTCCGGTGGCATTTGG
ACCCTGTTCTCATGGCTACGACGCACTGATAGGTCATTCTCAAGTGAAAGTATCAGCAGC
GTTGGTTCCGATAGAACTGTTGCCAGTTTCGACTTCCTAGCTCCAATACACTATAAAGAT
AACCCAGGTATATTGTTACCTCAGATTCCAGAGACGGAAACATATAAGAAAAGGTTGAAT
GAACGAAACTTGCGAAGGAAATACGACCGTGATATAACTTTGCGACGTAAGTACGGCTTA
TTCAGAGAAGAGGTCACCAGTTTCGACGGCTTCAGCTTACCTTCTAAAAGACTACAAAGA
GTTTCACCAACTGGAAGGGATAGACGAGCCACCAGTGAAATCTTCCATCGCAGAGCTCCG
TACGTTCCTGGTAAGCGACGTGCCCCATTACCACCACAAACCGTAGTTTCAAACACTTTA
CCTCGTAGTTATAAAAGAAAAAGGCAAGCACCTAGGCCGCCCGTAAAATTTTCCGACGAA
AATATGGAAAGCAACAATATCGATAAGAATATGTTAAGAGAATCTAAATCCACGAACACT
AAATATATAGTCACAAGTCACCCTGAATCAGCAATGCAACCAGAAAATGATTTGAAAATT
CCACAACCTAAGGAGGTCAAGTTACGCAGCGAGAGGAGTTTTCTAAAACAAATTTTTGAT
AACCGGAAAAGGAACTCGGCGATTGATACAAGCCATGTGAAACTACTGCCAAGTATAAGT
GAACTTGATAAACAAGCAGCAGAGATAATAGCTACAAATAAGTTTCTTCATGGCGAGAGC
AGTGGGCATAAGGATGATAACTTTTCTAAATTGCCGATCCCAACATCGTCCAATGAGAAG
AAATGGATATGTAAATTGTGTTATAGAAAATATGACGCCTCCATTGTTTCGTGCGTATAC
TGTATTACAAGTAATAAAAATAAAAAAATAGCTTCCAATATATACACACAGACAGATGTT
AAAGCGATGTCTAGCAAAGACAGCGAAATTGACGAGAAGAAGAAGTTAAAGGAAATGTTA
AAAGAAATGAAAGATTCCTTGCCCAAGAGACCAAAGCATAACGTTAATAATGAAAAAACT
AATATTTCTTCAACAGAAACACCTACCCTACGAATTGGGTCGGCCATAGAAAATATTGGT
GTAAACGCTGAACAGTCAACAAATTCCAAGTTTCACAATCAAGACAAAAAAGTCATAGAA
AGTAGAACTTGCAATAAGATTTTGAATTTACCGTCAGAACCATCTACCTCCGATCGACAC
ACTGACATTTTTGTTGGTAACAGTTCTAAAGTCACAAATCAATTCAGGAATCCTGATGGA
AGTATTAATCACGGTTCTCATTGTGACGATGTAAAAATGGGAATATCAAATTCTAGAAAA
TATAATTTTCTTCTGGGCGCCGATCCAAAGCCAACAAATAATTTAATCAACAAACAATCA
TCCGATGGTTTGTTGGCTGAGACGAATAAAAATAGTGTAATAATTGACAAAAAAACAATG
GTTTACAATAATGAAGATAAGACTAAAACAACAGTAAGTCAACAACCACAAAGTTCAGGG
TTACAAATCATTAAAATAAATAAAAAGTCAGACGTGCCACTCAAAGGAAACCGGACTGAT
GTAGAGATTGTTAACACTGATAATAAGTCGAAATCAACTAAAATTTTAAAAATCAATCAA
TCTTCTTCAAACGTACAATCTAAAAGCTGTATCAAAGACGAACCTAAAAGTCGCAATGCA
ACAACGGAACAGAGCACAGAACAGTCGAATAAAAAAACAATTATATTAAAGGAAACAAAA
ATGGAAAGTGTCCGACTTGGTGATGTCATATCATCAGAAAACATCCGTTTAAACGATACC
AACAAAACCGTGCCTGATAGTAAATTGAACACGCCACTTAGGATATCATCATTATTAAAT
CCTTTATACTGTCCAAAAACGGAGGTTTCAAATAATAAAATTGAAACCGAGATCTTACAG
ACAAAACCTGATAGTAGTGGTAAAAACGGTGACGTAAATAATACTATCTTATCATCTAAT
AGTTCTGCTGCAAGTGCTTCCAAGAAATCCAATGAAGTCCATGGTGCTAGCACTTCTAAG
CAACTTGAAAATGATTTGCCGTCTAATAATCAACTAAACACTGAAACTTCGGCTACAAAA
ACCAACTCCAATATAGATTATTTGAATCTTCATGCAAAACGTAGGGACCTAATAAATCAA
TTAGAATCAGCCATTTCTAAAGGTGACGAAAAAACCGCAGCTGATGCGGCGGCGAATCTC
GCTAAGCTAAAATTGTCTTGCTCTGTTTTATCATTTTCTTCTCAAATAGTTGGATTAGTC
AAAAATACACCAAATGACGCTAACAAAATTGAAAAAGTTGCTCAAGATGGCAACATTAAC
GCAGTAAAAATAAACGGCTCTAAGGAAGTTGAAAAACAACACCGTGAACAATTGACAATT
ACTGGATCGGCAGTTCTAAACAATTTCCAACCGTCAACATCTAGGGGAGACTCAGTCGAA
GATATGGTTCAGATTGAAATATGGGTGGAAGATAAAGAGGCCGCTAGGGGTCCTATACGT
ATGAAAGTTAAAAGGAAAGCCGTGATGGGGGATTTGAAGCGACAAGCTGACGCAGTACTC
GGTCTTGAAATACGTTTACAGCGGTGGATTATTGGCAAAAACCTGTGCACTAACGACGAT
ACACCCCTCCTCACCCTGGCAGGTCCTGATTTCAAGGCGCCTTTCTATTTGTGTTTAGTT
GAACCTGGTACTAATAAGGATGATACCAGTAAAGTCAGTGAAATTTCTAATGACAATAAT
AAAAATGTGCCAAATAAAATAAACAATAAGGAAACGGGTGACGTTTACTCGGAGTTAATA
AAATTGGAACAGCAAGCACTCGTGCCAAATACCGAAGACTTTGAATGTGGCGTGTGTATA
GAGCAATGTCCGATGGGAAACGGTGCGGTCCTACGGGAATGCATACATACATTCTGCAGG
GAATGTCTGTCGGATGTCGTACGACACTCCCAAGAGGCGACCGTTTCATGTCCAGCTATA
GGCTGTCCTGGGACGTTGCAAGAAAGAGAAATACGCGCCCTCCTAACTCCCGAGGAATAT
GACCGTTGGTTGGCGAGGAGTCTCAGCACTGTGGAAAGTGGAACTCGCAATACGTTTCAC
TGCCGCACTCGCGATTGCACCGGCTGGGCGTTTTGCGAGCCTGGTGTTAGGAGATTTCCC
TGTCCTGTTTGTAAACATGTGAACTGTCTCCCTTGTAAGGCTGTTCACGAAAACGAAACA
TGCGAGACATATCAAGCAAGATTAAGTAGGGCTGCTACAGTGACGGATTCGAACCAAACA
GACGAGGGGACGCGGGCTCTGCTAGACTCACTGATTGCGAAAGGCGAAGCACTGGAATGT
CCTGAATGCAGCGCAATTATAACCAAGAAATGGGGATGTGACTGGATTAAATGCTCATCA
TGCAAGACGGAGATATGTTGGGTGACGAAGGGTCGCCGTTGGGGACCGGCTGGTAAAGGT
GATACAAGCGACGGTTGCAAATGTGGTGTAAACGGTAAAAGGTGCCATCCTTTGTGCGGC
TACTGTCATTAG
Protein sequence:
MNDEIEEEAPRPRPLSGGIWTLFSWLRRTDRSFSSESISSVGSDRTVASFDFLAPIHYKD
NPGILLPQIPETETYKKRLNERNLRRKYDRDITLRRKYGLFREEVTSFDGFSLPSKRLQR
VSPTGRDRRATSEIFHRRAPYVPGKRRAPLPPQTVVSNTLPRSYKRKRQAPRPPVKFSDE
NMESNNIDKNMLRESKSTNTKYIVTSHPESAMQPENDLKIPQPKEVKLRSERSFLKQIFD
NRKRNSAIDTSHVKLLPSISELDKQAAEIIATNKFLHGESSGHKDDNFSKLPIPTSSNEK
KWICKLCYRKYDASIVSCVYCITSNKNKKIASNIYTQTDVKAMSSKDSEIDEKKKLKEML
KEMKDSLPKRPKHNVNNEKTNISSTETPTLRIGSAIENIGVNAEQSTNSKFHNQDKKVIE
SRTCNKILNLPSEPSTSDRHTDIFVGNSSKVTNQFRNPDGSINHGSHCDDVKMGISNSRK
YNFLLGADPKPTNNLINKQSSDGLLAETNKNSVIIDKKTMVYNNEDKTKTTVSQQPQSSG
LQIIKINKKSDVPLKGNRTDVEIVNTDNKSKSTKILKINQSSSNVQSKSCIKDEPKSRNA
TTEQSTEQSNKKTIILKETKMESVRLGDVISSENIRLNDTNKTVPDSKLNTPLRISSLLN
PLYCPKTEVSNNKIETEILQTKPDSSGKNGDVNNTILSSNSSAASASKKSNEVHGASTSK
QLENDLPSNNQLNTETSATKTNSNIDYLNLHAKRRDLINQLESAISKGDEKTAADAAANL
AKLKLSCSVLSFSSQIVGLVKNTPNDANKIEKVAQDGNINAVKINGSKEVEKQHREQLTI
TGSAVLNNFQPSTSRGDSVEDMVQIEIWVEDKEAARGPIRMKVKRKAVMGDLKRQADAVL
GLEIRLQRWIIGKNLCTNDDTPLLTLAGPDFKAPFYLCLVEPGTNKDDTSKVSEISNDNN
KNVPNKINNKETGDVYSELIKLEQQALVPNTEDFECGVCIEQCPMGNGAVLRECIHTFCR
ECLSDVVRHSQEATVSCPAIGCPGTLQEREIRALLTPEEYDRWLARSLSTVESGTRNTFH
CRTRDCTGWAFCEPGVRRFPCPVCKHVNCLPCKAVHENETCETYQARLSRAATVTDSNQT
DEGTRALLDSLIAKGEALECPECSAIITKKWGCDWIKCSSCKTEICWVTKGRRWGPAGKG
DTSDGCKCGVNGKRCHPLCGYCH