| New model in OGS2.0 | DPOGS211174 |
|---|---|
| Genomic Position | scaffold196:+ 60099-62041 |
| See gene structure | |
| CDS Length | 1407 |
| Paired RNAseq reads | 631 |
| Single RNAseq reads | 1692 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003161 (2e-36) |
| Best Drosophila hit | Cwc25 (5e-12) |
| Best Human hit | pre-mRNA-splicing factor CWC25 homolog (4e-15) |
| Best NR hit (blastp) | PREDICTED: similar to ENSANGP00000012399 [Nasonia vitripennis] (2e-38) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000012399 [Nasonia vitripennis] (3e-18) |
| GeneOntology terms | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR022209 Pre-mRNA splicing factor IPR019339 CBF1-interacting co-repressor CIR, N-terminal |
| Orthology group | ND |
Nucleotide sequence:
ATGGGAGGCGGTGATTTGAATACGAAAAAAGCTTGGCATCCCAGCAACTTAAAAAATCAG
GAACGTGTCTGGAAAGCGGAGCAAGCTGCTGCCGCCGAAAAGAAACGAATTGAGGAATTA
GAGCGGGAACGAGCACAGGAGAGAGATCGAGAGGAGTTGAATGCCTTATCCAGACAAAAT
GTCAACACTAATACAACTCAAGAAAATAGGCTCCATTGGATGTACGATAAACCAGATAAA
CAGGTGCAACAAGAAGATTATTTGTTGGGAAAGGCGATTGATAAAAACTATGACCAAGGT
GATAAGCAGGATCAAAATGAGATCCCAGCAGTATCCCGCCGAGTTGTTGGATCTAGCATG
ATGACTGCTGGAGGCGATGTTCAAGTGGATTTGGCAAGGAAACTCCGCGAGGATCCATTG
TTGCTGGTGAAGGAAAGGGAGAGAGCTGCGAGGGCGGCATTGCTTAACAATCCAATCCAG
AGACGCAAACTGACTGAGCTCTTAAGAAAAGAACAAGAAAAGAAGATATTAAAAAAAAAG
TCCAAGAAAAGTAACATTGATGAACTGCTTGCTTCCAAATTAAGTGCCCTAGCTGGTGAA
AAAAGCATGAACCTAGCAAAATTACTTGACTCAGACAGTTCATCGTCAGATAGTTCGTCA
TCATCATCACGGAAGAAAAAAACTAAAAAAAAGAAGAAAAAGATGTCAAAACATAAATCC
AAAAAGCACCAAGGAAGTGACAGTGACGAAAAACAAGAAAAAAGTAAAAAGTCCAAAGAT
AAGAAGAAACATAAGGATAGAAAAGATAAAAACGATGACAGTGATGCTGGAACCATTTCC
AAACGAGAAAAATATCACAATGACTTAAAGTTCGATGATAAAAAATATCCTTCATCAATG
AAACGTAAAAGTCATGTCGATAGTGATGGTGAACCTCAAAGAAAAAGTAGGAAATCTCTT
AAAGAAGTTTCACCATATCAAAAAAGAAATGAAAGCTATAGCCAGGATCGGTATAGACGC
TCCAGCGGTGATAGAAACAGATCGAGGAGGGAAACCGAAAATGATGACAGGAGAAACTCT
GATCGAAGGGGGCCATCAAGGTCCAGGTCAAGATATGATCAAAAAACTCCCCGGGATAAT
CAGAGATCTGAGTTAAGTCAGGACGAGAAGGCAGCCAAATTAGCGGCTATGGTTCAAGCT
GGTGCGGAGAGGGAAATACAGAGGGGGAGAAGGGTCGCTGAGCAATTAGCAGAGAAAGCT
GCCGAAGACACTACGACCTTGCCAAGGTCATCCCACAAGAACCAAGCGCGGACACTACCG
GACTCCCTCGAAAGCCGCATCCATTCAAATCGTCACAACATTCAACGCGACAAACGACAC
ATGAACGAACATTTTGCTAGGAGATGA
Protein sequence:
MGGGDLNTKKAWHPSNLKNQERVWKAEQAAAAEKKRIEELERERAQERDREELNALSRQN
VNTNTTQENRLHWMYDKPDKQVQQEDYLLGKAIDKNYDQGDKQDQNEIPAVSRRVVGSSM
MTAGGDVQVDLARKLREDPLLLVKERERAARAALLNNPIQRRKLTELLRKEQEKKILKKK
SKKSNIDELLASKLSALAGEKSMNLAKLLDSDSSSSDSSSSSSRKKKTKKKKKKMSKHKS
KKHQGSDSDEKQEKSKKSKDKKKHKDRKDKNDDSDAGTISKREKYHNDLKFDDKKYPSSM
KRKSHVDSDGEPQRKSRKSLKEVSPYQKRNESYSQDRYRRSSGDRNRSRRETENDDRRNS
DRRGPSRSRSRYDQKTPRDNQRSELSQDEKAAKLAAMVQAGAEREIQRGRRVAEQLAEKA
AEDTTTLPRSSHKNQARTLPDSLESRIHSNRHNIQRDKRHMNEHFARR