New model in OGS2.0 | DPOGS212954  |
---|---|
Genomic Position | scaffold2183:+ 119-2756 |
See gene structure | |
CDS Length | 540 |
Paired RNAseq reads   | 77 |
Single RNAseq reads   | 265 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001737 (2e-47) |
Best Drosophila hit   | CG4813 (5e-20) |
Best Human hit | E3 ubiquitin-protein ligase RNF220 (9e-19) |
Best NR hit (blastp)   | PREDICTED: similar to CG4813 CG4813-PA [Tribolium castaneum] (1e-30) |
Best NR hit (blastx)   | PREDICTED: similar to CG4813 CG4813-PA [Tribolium castaneum] (2e-26) |
GeneOntology terms    | GO:0008270 zinc ion binding GO:0005515 protein binding |
InterPro families    | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001841 Zinc finger, RING-type |
Orthology group | MCL11051 |
Nucleotide sequence:
GACTATCAGAACGATGAGCCGTCTACCTTCGGCTCGGAGTACCAGTGGTGTGGTGAGTGG
AGGGTGCGGGCCGCCGCCCTCCAGGACGGGGAGGGCCGCCTCGGGACCAGTGTAAGGAGA
GCCTCCACTGATCAGGCGCTGGTCGTGGACGGTGACGAGGACGCCGAATTATACGGACCC
CCGCAGTACTCGCCCTCCAGGATAGCTCCAGAGGCTGACATCCCCGAAGCCGAGGATCCG
AGGGAGAGAGATTCCGACAGTGAGGTAGTCACGAAACAGAACGGCTTAGTCGAGGCCAGC
GCAGAGACCAGGATACAAGCATTGAAAGAGAAAATCAAAGAATTGGAAAAGAAACAGAAT
TCGTCATTGGAGGCCAAATGTCTCATATGTCTTGGAGGGTACACGTCTCCTGCTGTATCA
ATACAATGCTGGCATGTTTATTGTGAGGTCTGTTGGCTGCAATCTTTAAGGGCTAAGAAG
ATCTGCCCTCAGTGCAACGCTATCACAACAGCCGAACATCTCAGAAGGATATATATGTGA
Protein sequence:
DYQNDEPSTFGSEYQWCGEWRVRAAALQDGEGRLGTSVRRASTDQALVVDGDEDAELYGP
PQYSPSRIAPEADIPEAEDPRERDSDSEVVTKQNGLVEASAETRIQALKEKIKELEKKQN
SSLEAKCLICLGGYTSPAVSIQCWHVYCEVCWLQSLRAKKICPQCNAITTAEHLRRIYM