| New model in OGS2.0 | DPOGS200970 |
|---|---|
| Genomic Position | scaffold798:- 8080-19010 |
| See gene structure | |
| CDS Length | 1194 |
| Paired RNAseq reads | 673 |
| Single RNAseq reads | 2227 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011057 (6e-108) |
| Best Drosophila hit | M-spondin (5e-78) |
| Best Human hit | spondin-2 precursor (2e-40) |
| Best NR hit (blastp) | PREDICTED: similar to GA10108-PA [Tribolium castaneum] (8e-111) |
| Best NR hit (blastx) | PREDICTED: similar to GA10108-PA [Tribolium castaneum] (4e-109) |
| GeneOntology terms | GO:0005578 proteinaceous extracellular matrix |
| InterPro families | IPR000884 Thrombospondin, type 1 repeat IPR009465 Spondin, N-terminal |
| Orthology group | MCL12537 |
Nucleotide sequence:
ATGACTGTTTATCGAATGGTATTACATACCTATTGGACCAGGGAAAAATTTCCAAAGCAC
TATCCAGACTGGAGACCCCCTGCTCAGTGGTCGAAAGTATACGGTGTATCCCATAGCCGT
TCATACGTGCTATTTCGTCTTGGAAGACGAGTTTCTCCATCAGTCCGTCAGTTTGCTGAA
TCAGGTAGATCTGATACACTCGGAGCAGCGCCTGGTACCCTTGATGTCTTCGGAGGAGCA
GCCATCGGTCAGGGATTGGGCAGAGCCGAGGCTGATTTCTTTGTCGATGGAAATCACTCA
AGGGTCTCAGTGATGACAAAGATGATACCGTCTCCTGATTGGTTCATTGGAGTTGACAGC
TTTGATCTTTGCGTTGACGGGAATTGGCTGGACAGCATTACTATAGAGGTGGACCCATTG
GACGCGGGAACGGACAACGGTTTCACGTTCACAGCGCCGAACTGGCCGACAGCCCCCCAG
GGGGTCGCGTATCGCATCACATCCAAGTACCCCTCGCACCCCGCCGGCTCCTTCTTCTAC
CCCCACCTGAGGAGACTTCCGCCGATCGCCACGTTCCAATTTATTAAGCTACGGGAATAC
GAGCTCTCGGAAGTATTTCATCGTGACAGTGATGACCGTAAATATGACGTGCTCCAACTG
GACAAACTAAACCACAATAATGTTGATGTTCCTGATGGCAACCGAGCACTCTCCATCGCT
GAAGAAGTTGAAAGAGCTGAAGCACCAAGGATTTACTCGGACGGATCTCTGACAACGCCG
GATAGCTCGTATTCATATTACTCCATTACCAACAACACAGCAAGTACTGAGGAGCCAAGA
TCAGCAAATGAGGTACCGAATCCTACAGCAAGCGAGCGTTCAGCTCTCCGGAGTCTGGCT
AGAAGATACCGAGCTAGAAGACGACGTAAGCTTCGCGGAGACAGTACTGACCCGGCCGAG
AGAAGGAAGCGAAAAAGAACAAGGCTCCTAGACTGTCGGGTATCTCAATGGGGTGAATGG
AGTCCATGTAGGAATGACGGCAACTGCGTCGGATCAGCTCTAAGAACTCGAAGAATTATC
CGTCGTCAACGACCTGGTGGAAGCCCTTGCCCTCCCACAGCGCAGTCCCGATGGTGTGCT
ACCAACTGCACCACACCACCTCCAATAGAGGACTGGCGAAACAACCTCACGTAA
Protein sequence:
MTVYRMVLHTYWTREKFPKHYPDWRPPAQWSKVYGVSHSRSYVLFRLGRRVSPSVRQFAE
SGRSDTLGAAPGTLDVFGGAAIGQGLGRAEADFFVDGNHSRVSVMTKMIPSPDWFIGVDS
FDLCVDGNWLDSITIEVDPLDAGTDNGFTFTAPNWPTAPQGVAYRITSKYPSHPAGSFFY
PHLRRLPPIATFQFIKLREYELSEVFHRDSDDRKYDVLQLDKLNHNNVDVPDGNRALSIA
EEVERAEAPRIYSDGSLTTPDSSYSYYSITNNTASTEEPRSANEVPNPTASERSALRSLA
RRYRARRRRKLRGDSTDPAERRKRKRTRLLDCRVSQWGEWSPCRNDGNCVGSALRTRRII
RRQRPGGSPCPPTAQSRWCATNCTTPPPIEDWRNNLT