| New model in OGS2.0 | DPOGS210180 |
|---|---|
| Genomic Position | scaffold7221:- 259-4635 |
| See gene structure | |
| CDS Length | 1227 |
| Paired RNAseq reads | 1129 |
| Single RNAseq reads | 2890 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014194 (2e-175) |
| Best Drosophila hit | vacuolar protein sorting 35, isoform A (3e-113) |
| Best Human hit | vacuolar protein sorting-associated protein 35 (5e-110) |
| Best NR hit (blastp) | PREDICTED: similar to vacuolar protein sorting 35 isoform 1 [Apis mellifera] (1e-151) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Nasonia vitripennis] (4e-132) |
| GeneOntology terms | GO:0016192 vesicle-mediated transport GO:0006897 endocytosis GO:0005768 endosome |
| InterPro families | IPR005378 Vacuolar protein sorting-associated protein 35 |
| Orthology group | MCL12691 |
Nucleotide sequence:
ATGGCAATTACTGATGAGCTCCGCCACTTGGAACTGTATCTTCTAGAAGAATTCCAGAAG
GGTCGTAAAGTTGCAGATTTGTATGAACTAGTACAGTATGCTGGGAATATTGTACCTCGT
TTGTACCTATTAATAACAGTCGGATTAGTTTACATCAAAACTAATACAAATTTAAGGAGG
GATTTGCTCAAGGATCTGGTTGAAATGTGCCGTGGCGTGCAGCATCCGTTACGCGGGCTG
TTTCTCAGGAATTATCTCCTCCAGTGTACAAGGAATGTTCTGCCCGACACCGTGGAAGCG
GAGAATGAAAATGAGGGGAATGTCAGAGACGCTATCGACTTTGTGCTGATGAATTTCGCC
GAAATGAATAAGCTGTGGGTCAGGATGCAACACCAAGGACATTCGAGGGACAAAGAGCGT
CGTGAGCGTGAAAGATCAGAACTTCGCATCCTGGTTGGCACCAATCTTGTCCGAGTGTCA
CAGCTGGAGTCTGTCAGTGAGGCGGATTATCGGAGGCTGGTGCTGCCAGCTATATTGGAA
CAGGTCGTGAGCTGCAGGGATCCCATAGCACAGGAATATCTCATGGAGTGTATCATACAG
GTCTTCCCCGATGAGTTTCACTTGGCAAACCTTCAGCCGTTCCTGAAGTCATGCGCTGAA
CTGCAGCCCGGTGTTAACATAAAGAACATCATTATAGCGCTCATTGAACGACTTGCCGCC
TACAGTCAGAGGAACGAGGGGAATGTGAATCTGAGTGTTGTCCTTGATGATGGACAGGAA
CAAGAGGTGCAATTGTTCGAGGTGTTCTCTGATCAGGTCGCTGCCATCACTCAGAGTCGC
ACAGACATGCCGCCGGAGGACATGCTCTCTCTGCAGCTGGCGCTGTTGAAACTAGCACAG
AAATGTCACCCTGACAAGCTGTCTTATGTGGACAGGGTGTTAGCTCACACCGACAGGATA
TGTGTAGACATACTACCATCAGGAAAACCATACTTGGAGCACAATACACCCGTGTTCAAA
GAGCTCATGAAGATACTGAAGCTGCCAGCTGATCATTACAAGAACATACTCACATTGATC
AAGCTCCAGAACTACGCTCCACTCATCAACAGGCTGAGCCAGCCCGGCAGGATGCTGATA
GCTGTTCATCTTATCAACGACGTCCTCGAGAGCAATACAACTGTCTCCACACCAGAAGAT
GTGAGTAATTATTACCCTTCCTTCTAA
Protein sequence:
MAITDELRHLELYLLEEFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTNTNLRR
DLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTVEAENENEGNVRDAIDFVLMNFA
EMNKLWVRMQHQGHSRDKERRERERSELRILVGTNLVRVSQLESVSEADYRRLVLPAILE
QVVSCRDPIAQEYLMECIIQVFPDEFHLANLQPFLKSCAELQPGVNIKNIIIALIERLAA
YSQRNEGNVNLSVVLDDGQEQEVQLFEVFSDQVAAITQSRTDMPPEDMLSLQLALLKLAQ
KCHPDKLSYVDRVLAHTDRICVDILPSGKPYLEHNTPVFKELMKILKLPADHYKNILTLI
KLQNYAPLINRLSQPGRMLIAVHLINDVLESNTTVSTPEDVSNYYPSF