New model in OGS2.0 | DPOGS206517  |
---|---|
Genomic Position | scaffold1042:+ 49719-54297 |
See gene structure | |
CDS Length | 1845 |
Paired RNAseq reads   | 235 |
Single RNAseq reads   | 1307 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013935 (7e-59) |
Best Drosophila hit   | tektin A (2e-82) |
Best Human hit | tektin-4 (6e-34) |
Best NR hit (blastp)   | testis specific tektin [Bombyx mori] (4e-106) |
Best NR hit (blastx)   | testis specific tektin [Bombyx mori] (2e-105) |
GeneOntology terms    | GO:0005875 microtubule associated complex GO:0008017 microtubule binding GO:0007017 microtubule-based process GO:0000226 microtubule cytoskeleton organization GO:0005874 microtubule |
InterPro families    | IPR000435 Tektin IPR019372 Lipoma HMGIC fusion partner-like protein |
Orthology group | MCL15746 |
Nucleotide sequence:
ATGGGTTCGAAAATCGAATACGTGGATTCGTCACATTTATACGCTACGAATTATGTGCGT
AATTCGAAAGCTATCGGAGTGCTTTGGGCTATATTCACAATTTGTTACGCGATTATAAGC
GTTGTGGCATTCGTGACACCGGAATGGATTGGCGATTTGGAAACAGAGTATCCGAGGAAA
TTTGGTTTGTGGCAGATTTGTAGAACGGACGATGCCGTTGAGGATTGTAAAGGGAGATTG
GACGATTTTACTTCGATAAATGGTTTTGTGTTCAAAATAGCTACGGTGTTAGTAGGCGCG
GCGGTCGCTCTGGCCTTGTTTACTATATGTGCCATGCTTTTATTCTTCTTCTGTCGATCA
ACAACTGTATTTCACATCTGCGGATGGTTGCAGCTTATATCCGCTGATAGATGTCCGAAG
GTATGTACGGATATTGGAGCTTTCAAGAAAGCTGCAAAGAGCCCGGAGCAAGTAAAAGAA
GAGATAAAAGCTGCCGAGGAAGCTAAAACACAAAAAGCCTCCGAGGAAAAAGCTTTAAAA
CCTCCCGAAGAAGAGTCAGAGCCGTTGAAACCTGAACAATCTGGTGAGGAATATCTGCCA
AACTTAAAGCCCGGTCCCGATGGTAACGTAGACTGGACGCCGCTAGGAGACATGACTGGA
ACAAGACCTGGAGTCAACAAGTACAGCATCAGTAGATATTCACTTAGTGAATGGAGAAAT
CACAACCAAAAGGTCCTCGATCCCGAGATCATCGTCGAGTCGAATATTGTGGAATACAAC
GCGAAAACATCCATGATGCAAGCGTTTGGAAATATTGATAAACAACAGAGCGAGAACTTC
AAGAGACTGCGGCAGAAGGCGAGGGACATATTCAGGTGGAAAGTTGAAGTTGAGAAAGCA
TGCAAAGCGATCACAGACGAAGTGGAACTCCTAGAAATAGAGAGACAGAGACTGAAAGGT
GCTTCGAAGGTCCTCATGTTACCCGAGTCTATTTCCAAAGAATGTTTAGATTTACGCTCT
AACAGATTCCAACCTGATTTAGTCGCTGACTTGGCTGAAAAGGAACTGATCAAAGAGATG
AATTTAGTGAGTGAAGTGAGAGCGACTTTAAAAAACACCCTCGACGAAATAGAGAAGCAG
ATGGCCGTTAACAAGGCAGCAAAACATCGGATAGAATATGACTGGTGTGACAAAACTATG
GCGTATAATACCGAGGCCACGAACTTAGGGCTCGATACTAAATCGAATACTATCATGTTC
AGGCCTGGTGCGACCAGGTTTGGCGAATACACAGCTCCTTTGGAGTATTGGGAGTACTTT
TGCAGAGAAAACGTTCAAAACTGTGAAGCCGCCAGACAGAAATCGGCTGATTTACGAGGA
AGCCTAAACGCAATTTTGGTGAACGGCGGAAGAAAACTTCGCAATCAAGCGGACAGGACT
GATATGGCAAAACTAGAAGAGACGTTAAGAAATACGCTTCAAAGAATAGCTGATATGGAA
TCCCTGATTGAAAATTTAAAAGATTCCATAAAAAAAATGGACGCTGCGATGAAACTAGCT
CAAACCAGATTAGACAATAGGAACAACTGGAGACCTCACGGGGAAAGTGTGAGGGACCAG
CCGCATTTGGGTCTCATCGAGGAGGTGAAAAAGATTCACGAGACTGTGACGTCCTTGCTT
GGACAACTAAATAACGCAGAAAGAGTTCGATCTGATCTCCTAAAGAAGAGAATAGTTCTA
GAGAAGGATATTGCATCTAAGAGGAAGACCTTGAACATAGATCGTGATAGATGTGGTATG
GTGAGATCACATTATCCGTCGGCATCAGAATTAGCTGGTTATTGA
Protein sequence:
MGSKIEYVDSSHLYATNYVRNSKAIGVLWAIFTICYAIISVVAFVTPEWIGDLETEYPRK
FGLWQICRTDDAVEDCKGRLDDFTSINGFVFKIATVLVGAAVALALFTICAMLLFFFCRS
TTVFHICGWLQLISADRCPKVCTDIGAFKKAAKSPEQVKEEIKAAEEAKTQKASEEKALK
PPEEESEPLKPEQSGEEYLPNLKPGPDGNVDWTPLGDMTGTRPGVNKYSISRYSLSEWRN
HNQKVLDPEIIVESNIVEYNAKTSMMQAFGNIDKQQSENFKRLRQKARDIFRWKVEVEKA
CKAITDEVELLEIERQRLKGASKVLMLPESISKECLDLRSNRFQPDLVADLAEKELIKEM
NLVSEVRATLKNTLDEIEKQMAVNKAAKHRIEYDWCDKTMAYNTEATNLGLDTKSNTIMF
RPGATRFGEYTAPLEYWEYFCRENVQNCEAARQKSADLRGSLNAILVNGGRKLRNQADRT
DMAKLEETLRNTLQRIADMESLIENLKDSIKKMDAAMKLAQTRLDNRNNWRPHGESVRDQ
PHLGLIEEVKKIHETVTSLLGQLNNAERVRSDLLKKRIVLEKDIASKRKTLNIDRDRCGM
VRSHYPSASELAGY