| New model in OGS2.0 | DPOGS206073 |
|---|---|
| Genomic Position | scaffold48:- 112759-116308 |
| See gene structure | |
| CDS Length | 861 |
| Paired RNAseq reads | 810 |
| Single RNAseq reads | 2420 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006855 (3e-99) |
| Best Drosophila hit | CG7601 (2e-78) |
| Best Human hit | dehydrogenase/reductase SDR family member 7B (1e-59) |
| Best NR hit (blastp) | PREDICTED: similar to short-chain dehydrogenase [Tribolium castaneum] (8e-92) |
| Best NR hit (blastx) | PREDICTED: similar to short-chain dehydrogenase [Tribolium castaneum] (3e-83) |
| GeneOntology terms | GO:0016491 oxidoreductase activity GO:0005575 cellular_component GO:0055114 oxidation reduction GO:0005488 binding |
| InterPro families | IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR016040 NAD(P)-binding domain IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR020842 Polyketide synthase/Fatty acid synthase, KR |
| Orthology group | MCL14412 |
Nucleotide sequence:
ATGTACCGTTTATGTGGACGGCTAAGAGATACAAAACGTAGAAATGCACTGCAGGGAAAG
GTTGTTGTCATAACTGGTGCGAGCTCAGGCATTGGTGAAGCTTTAGCTCATGTGTTCTAT
GAGTATGGCTGTAAAGTAGTCCTTGCTGCTAGGAGGAAAACAGAATTGGAACGAGTAAAA
AATGATCTATTGTCAAAGAAAATTTCTCTCCCGACAGAAGAGCCCATAGTACTGGAGCTA
GATCTTTCGGATCTTGAGCAATTGGAAACTTTTGTTACCAAAGTTCATGAAGTCTGTAGT
GAAATTGACATTCTGATTAATAATGGAGGGGTATCTCATCGTGGATCAATTCTCTACACA
AATCTGGAAGTGGACAAGAAGATTATGTTTACCAATTATTTTGGTTCTGTAGGTCTTACA
AAAGCTGCGTTACCGAAGATGGTAGAAAGAAAAAGTGGCCACATAATATTCATAAGCTCT
GTACAGGGCTTGATAGCAATACCAGATCGCTCTGCATATGCGGCTTCAAAGCATGCTATG
CAGGCATTCGGAGACTCGCTCCGTGCTGAAATGCATCAACATAATATAAAAGTCTCCGTA
GTCAGTCCCGGCTACGTGAAGACTGCTGTATCTATCAACGCTTTGACCGGAAGTGGTGAA
AAACACGCAGTAATGGACAAGAGTACTGCTTCTGGCTTTGAAGCTGAATATGTTGCAGAA
AAAGTTTTGGATATGGTCATCAATGAGGATAAGGACCTTATTATAAGTCAATTTGTGCCA
AATTTGGCGATCTTTTTAAGACGTTTTGCTCCTTCTGTGTACCATTGGGCAATGACTAAA
AGGGCTGTGAAGACAGCTTAA
Protein sequence:
MYRLCGRLRDTKRRNALQGKVVVITGASSGIGEALAHVFYEYGCKVVLAARRKTELERVK
NDLLSKKISLPTEEPIVLELDLSDLEQLETFVTKVHEVCSEIDILINNGGVSHRGSILYT
NLEVDKKIMFTNYFGSVGLTKAALPKMVERKSGHIIFISSVQGLIAIPDRSAYAASKHAM
QAFGDSLRAEMHQHNIKVSVVSPGYVKTAVSINALTGSGEKHAVMDKSTASGFEAEYVAE
KVLDMVINEDKDLIISQFVPNLAIFLRRFAPSVYHWAMTKRAVKTA