| Genomic Position | scaffold78:- 102480-111267 |
|---|---|
| See gene structure | |
| CDS Length | 3801 |
| Paired RNAseq reads | 413 |
| Single RNAseq reads | 1262 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006346 (3e-148) |
| Best Drosophila hit | Prp18 (7e-105) |
| Best Human hit | DNA replication licensing factor MCM9 isoform 1 (1e-159) |
| Best NR hit (blastp) | PREDICTED: similar to mini-chromosome maintenance deficient 9 [Monodelphis domestica] (5e-170) |
| Best NR hit (blastx) | PREDICTED: similar to mini-chromosome maintenance deficient 9 [Monodelphis domestica] (4e-162) |
| GeneOntology terms | GO:0003677 DNA binding GO:0005524 ATP binding GO:0000166 nucleotide binding GO:0006260 DNA replication GO:0017111 nucleoside-triphosphatase activity GO:0003674 molecular_function GO:0008150 biological_process GO:0005575 cellular_component |
| InterPro families | IPR001208 DNA-dependent ATPase MCM IPR003648 Splicing factor motif IPR003593 ATPase, AAA+ type, core IPR004098 Prp18 IPR012340 Nucleic acid-binding, OB-fold IPR014906 Pre-mRNA processing factor 4 (PRP4)-like IPR016027 Nucleic acid-binding, OB-fold-like |
| Orthology group | MCL16189 |
Nucleotide sequence:
ATGGACATTCTTAGGGCTGAAATAGCTAAAAAAAGAAAGCAGTTAGAAGAGAAAGATATT
TTGAGACCGGCAAAAAAATATTTTAAAAGAAGTGAACTCTTAGCTAAAGAGCATGAAGAA
TATTTGAAAAAATATTGTCCAAGTATTACCAATAATGAAGAGGACAATGAGACAGAAAAT
GCTGAGAAAGCAAAAAAGCAAGAGAATGAAACTGATCAAACAGAAAGTATATCATTACCA
AGAGCAGAAGTTGTCAAAAGGTTAAGGGATCGTGGACATCCTATAGTACTATTTGGTGAA
AGCGAATTACAATCTTTTAAAAGATTGAGAAGAATAGAAATACAGGAACCAGAAGCTAAC
AGGGGTTTTAGGAATGATTTCCAAGAAGCTATGGAACAGGTAGATCAGGCCTATCTAGAT
GAAATATTGGCATTGGGTACTCAGAATGACAGTGAAAAACTTCAAAAAGAAGATGCCCTA
GATGATTCAGTTACATATGAATACATTCAGGAAATGTCTGTAACTATGGGAAAAGGAGAT
AGAAACCATGATATGAATGTTATCATGACATTATTACAGTTTCTACTCAAGCTTTGGGGA
CAACAGTTAAATGCAGCCACTGGGGATCAGAAGACAGCAATTAAACACAAAATGACGAGG
GCGACATATACACAAACGCAAGTTTATCTTAAACCTTTAATGAGAAAACTCAAGAAGAAG
AATCTTCCTGAAGATATATGCGACAGTCTTACAGAAATCACAAAACATTTGCTGGATAGA
AATTATATTATGGCGAGTGATGCTTATCTACAGATGGCTATTGGTAATGCACCATGGCCT
ATTGGTGTTACTATGGTTGGTATCCACGCCCGTACAGGTCGTGAAAAGATTTTCTCAAAA
AATGTGGCTCATGTGATGAATGATGAAACACAGAGAAAATATATTCAGGCTTTGAAGAGA
TTAATGACCAAATGTCAAGAATACTTCCCAACGGATCCTTCTAGATGTTGTTCTGCTATA
TTGCGTAACAAAATATTTAAAAAAAGGCACAATTTGAATCCCGTGCGGCTACAAGTTAAG
AAATACTCATCTGTCAATTGTCATTCTTTCTTAAAACTATTTGAAACATACCCCGACGTC
GGTGATAAAGTACTATGTAGCCCTGTGAAAACTTTACCGGCATGTAATTCAGATATAATA
AAACTTCAGCAGGAAATTCTAGAAGAGGACAAATTTAGTTCCCTAATTAGTAAATTGCAA
TTTAAATACCTAAAAAGAAATGTACATGCACGATTTTTTGGATTACCTGTGTGTCCTGAA
TTGCATAGAACAATATTTCCCAAAAATGTTGATCTTGGATGCTTTTTAAAAGTTAGTGGT
ACTGTTGTCCGTGTTACACAGTCTAAAATGTTAGAATACCAGAGAAAGTATGTGTGTATG
AAATGTAAGTTTGAAAACACCATTGAAGCAGATTTTGAAAACAGATACATCTTGAGAGCT
CCCACTAAATGTGGAAACACTGAAATAAGATGTAAATGTTCTACTTTTACTCAAATTAAT
TTAGTTTCTAGGGAGCATTGTAGAGATTATCAAGAAATAAAAATCCAGGAACAAGTTAAT
AAGCTTAGTATTGGGACAATTCCTGGGTCAATGTGGGTTGTTCTGGAAGATGACCTTGTT
GACTGTTGTAAACCTGGAGACGATGTTGTTATATGTGGCATTGTACGTCGTCGTTGGCGT
CCGCCAGTACATAATAAAAAATCTGAAGTAGAAATTGTATTACAAGCCAATTACATTGAA
GTCAGTAACTCACAGAAATCAGAAGCTATAGCGATGGCGCCTGATGTTAAAGACTGTTTT
GATGAATTTTGGTCTAAATATGAGCAATGTCCTTTAAAGGGAAGAGATCAAATTTTATCT
TCTGTATGTCCTCAGGTTTATGGACTCTATCTGGTAAAACTAGCTGTTTTACTTACAGTT
ATCACTGGTTCTAACCATATCATTGAAAGCAAAAATTGTATTGAAGACAAACACACAATG
CATGTACGTGGGCAGTGTCATTTGTTGCTTGTCGGAGATCCAGGGACTGGTAAATCTCAG
TTGTTGAAAACGGGTGCGGAATTGACTCCACGGTCTGTGTTTACATCTGGCGCCGGCAGT
ACAAGGGCTGGATTGACTTGTGCAGCTCTCAGAGAAGATGGTGAATGGCAGTTAGAGGCT
GGTGCATTAGTGTTGTCAGATGGAGGTGTTTGCTGTATTGACGAGATTTCACATCTGAGG
GACCATGATCGCACTGCTATACACGAAGCTATGGAGCAACAGACTATATCAGTTGCTAAG
GGGGCCGGGGAAACCCAGCAACTGCGGGTTGTATCGGCGGCAATTCTGTACTCGTGCCAG
CGACACACAAAACTCGACGTTCAGTTCGGAACAAGGGCCATGCTCTTTGACAGGATGGCT
GGTATTGTATGTAAATTGAACACAAGGTGTGCTGTAATAGCAGCCTGCAATCCCAAAGGA
CACTATCAAAGGGATGAACCATTGAGTGTTAATGTATCCTTGGGCACTCCGCTTTTAAGT
AGATTTGACTTGATATTTATTTTACTTGATTCCAAAAACAGTGAATGGGATAAATTAGTT
TCAACGTACATATTGTTTGGCGATTCAGGTGTTTCGGCTAAGAAGAAATGGGATATCGAA
AAATTACAAATGTATATAAGCCTTATTGGTCCAAGGCCTACTGAAATCACAAAATCAGCA
AATATAATACTCCAAACCTATTATATGATGCAAAGGAAGTCTGAGTATAGGGATCCTTCA
AGGACAACTGTTAGAATGCTTGACAGTTTAATTAGGTTGTCTCAAGCCCACTGTCGTCTA
ATGTACCGAACAACTATATTACCAGTTGATGCGATTACAGCAGTATCTTTAATAGATCTA
TCAATGCAGGACTGCACATTGGACAAAACAGTAGATGCCTTACATTCGACATTTCAAAAA
TATCCTGACTTTCAGTATCTGTGTACAGCGAAACAACTTTTGACAAGATTAAGTTTATAT
GAGATATGGAAGGAAGAGCTATTATATTATGGTAAAATACTCCAGGTTGATCATAAAACT
TTAGAACATCATATAGATACTAAATGCGAAAGTCTGTTCGCAAGATATGATAATATCACA
GATAATAATATTCCACTCTCAACATCTATTGTCACTAGTTCATACTTTAAGAAGAATACA
GATGAATCTGATAAAAATATAACAAAAGGAGACATGGGTGAAGGTGATAGCAAAAAGGAT
AAAGTTATTAACGATAAACTAGCAGCAACTTTGAAAAAACATGCGACACTTAATAAGATA
GAGAAAAAACCACCTGTACATCAGAAAAAGAAACAAGTGAGGCGTAAACGAAAACAAGTT
ACTATTGGTGTAAGCGATTTAGTAAAATCTAATACAAAAAGGATTAAAGAATGTACATCG
AATAGTGATGATGAAGCATATATAGCTTCTGATAGTACAAATCATCAGGCAGATAAAATT
CTTAAAAATTGTAAAGATTTGGAGAGTTCAGAAATTGAAGATTTAACAAATGAGATATCA
AATAAAACTCTTAGCAAATTAAATCAATTCATATTCAAAGAAAGTTCTGATTTAAATAGA
TTCTACAATGAAAATCCTAATAATCGATCCACAAAAAGTGTAACAGAAAAAAATATTTTA
ACTAAATCAATAAAATCAGGATCAAGTTCACAAATTTCAATGTTTGAGAGTTCCGACTGT
GAAATTGACTTGGATATATGA
Protein sequence:
MDILRAEIAKKRKQLEEKDILRPAKKYFKRSELLAKEHEEYLKKYCPSITNNEEDNETEN
AEKAKKQENETDQTESISLPRAEVVKRLRDRGHPIVLFGESELQSFKRLRRIEIQEPEAN
RGFRNDFQEAMEQVDQAYLDEILALGTQNDSEKLQKEDALDDSVTYEYIQEMSVTMGKGD
RNHDMNVIMTLLQFLLKLWGQQLNAATGDQKTAIKHKMTRATYTQTQVYLKPLMRKLKKK
NLPEDICDSLTEITKHLLDRNYIMASDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSK
NVAHVMNDETQRKYIQALKRLMTKCQEYFPTDPSRCCSAILRNKIFKKRHNLNPVRLQVK
KYSSVNCHSFLKLFETYPDVGDKVLCSPVKTLPACNSDIIKLQQEILEEDKFSSLISKLQ
FKYLKRNVHARFFGLPVCPELHRTIFPKNVDLGCFLKVSGTVVRVTQSKMLEYQRKYVCM
KCKFENTIEADFENRYILRAPTKCGNTEIRCKCSTFTQINLVSREHCRDYQEIKIQEQVN
KLSIGTIPGSMWVVLEDDLVDCCKPGDDVVICGIVRRRWRPPVHNKKSEVEIVLQANYIE
VSNSQKSEAIAMAPDVKDCFDEFWSKYEQCPLKGRDQILSSVCPQVYGLYLVKLAVLLTV
ITGSNHIIESKNCIEDKHTMHVRGQCHLLLVGDPGTGKSQLLKTGAELTPRSVFTSGAGS
TRAGLTCAALREDGEWQLEAGALVLSDGGVCCIDEISHLRDHDRTAIHEAMEQQTISVAK
GAGETQQLRVVSAAILYSCQRHTKLDVQFGTRAMLFDRMAGIVCKLNTRCAVIAACNPKG
HYQRDEPLSVNVSLGTPLLSRFDLIFILLDSKNSEWDKLVSTYILFGDSGVSAKKKWDIE
KLQMYISLIGPRPTEITKSANIILQTYYMMQRKSEYRDPSRTTVRMLDSLIRLSQAHCRL
MYRTTILPVDAITAVSLIDLSMQDCTLDKTVDALHSTFQKYPDFQYLCTAKQLLTRLSLY
EIWKEELLYYGKILQVDHKTLEHHIDTKCESLFARYDNITDNNIPLSTSIVTSSYFKKNT
DESDKNITKGDMGEGDSKKDKVINDKLAATLKKHATLNKIEKKPPVHQKKKQVRRKRKQV
TIGVSDLVKSNTKRIKECTSNSDDEAYIASDSTNHQADKILKNCKDLESSEIEDLTNEIS
NKTLSKLNQFIFKESSDLNRFYNENPNNRSTKSVTEKNILTKSIKSGSSSQISMFESSDC
EIDLDI