| New model in OGS2.0 | DPOGS202603 |
|---|---|
| Genomic Position | scaffold78:- 44317-54330 |
| See gene structure | |
| CDS Length | 2880 |
| Paired RNAseq reads | 411 |
| Single RNAseq reads | 1047 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006348 (0.0) |
| Best Drosophila hit | roundabout, isoform A (6e-79) |
| Best Human hit | roundabout homolog 1 isoform a precursor (1e-77) |
| Best NR hit (blastp) | roundabout, isoform B [Drosophila melanogaster] (5e-81) |
| Best NR hit (blastx) | GL10711 [Drosophila persimilis] (1e-80) |
| GeneOntology terms | GO:0007411 axon guidance GO:0005886 plasma membrane GO:0005887 integral to plasma membrane GO:0016199 axon midline choice point recognition GO:0031982 vesicle GO:0008038 neuron recognition GO:0070983 dendrite guidance GO:0030424 axon GO:0030425 dendrite GO:0043025 neuronal cell body GO:0048813 dendrite morphogenesis GO:0004872 receptor activity GO:0007427 epithelial cell migration, open tracheal system GO:0007432 salivary gland boundary specification GO:0035050 embryonic heart tube development GO:0022409 positive regulation of cell-cell adhesion GO:0009649 entrainment of circadian clock GO:0005515 protein binding GO:0008201 heparin binding GO:0001964 startle response GO:0031987 locomotion involved in locomotory behavior GO:0048854 brain morphogenesis GO:0043234 protein complex |
| InterPro families | IPR007110 Immunoglobulin-like IPR003961 Fibronectin, type III IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR013783 Immunoglobulin-like fold IPR013098 Immunoglobulin I-set IPR008957 Fibronectin type III domain |
| Orthology group | MCL40060 |
Nucleotide sequence:
ATGGTGGATGTTGGTGGTAATGAATGTGATAACACCGTAACTGGGAGGAACCAATTTGTT
TATTTAGTTTTTGTGCATTTATTACTTATTGGACTGAATGGAACAAATGCACAAAATCGG
GCGCCACGAATCAAAGAACATCCATCGAACACGGTATCTGGTAGAAGTGAACCCGCCACA
TTGAGATGTGTGGTGGAAGGTCGACCCAAACCAACAGTTCAATGGTTTAAGGATGGGTTT
CCGTTACCACCAGCGGAAGATGGACATAGAGTTCTTCTGGAAGACGGATTACTCTTTTTA
AGGGTAAACCGAGGGAAAAAAGAAAGTGATGAGGGGGTTTACTGGTGTGTGGCTCGTAAT
ATAGCAGGGGAAGCTGCAAGTCAGAATGCTTCATTAAATGTTGCAGTTCTACGCGATGAC
TTTAGAGTTGAACCAAGAGACGTTCAGGTAGCTGCAGGAGAACCAGCTTTATTAGAATGT
ATTCCACCGCGTGGCGTTCCAGAACCTTCAGTTCACTGGCTGAAAGACGGGCAGTTATAT
GACATCGAGGTTAATGGAAGAGTAAAAATAACAGAAACGGGAAGTTTAAAAATTCTTGAA
ACGTTACCAAACGACAGTGGTCTATTTAGATGTGTGGCTTCCAATATAGCAGGGGAGAGA
CAATCGAGGGCAGCGGCACTTATTGTTCTGAGACGACCGCATTTTGTGGTGAAACCCAGT
AACGTTACTGCTTTAGTTGGACAAAACGTTGAATTCAATTGTCAGGCTTATGATAATAGC
GTAAAAGTAACCTGGGTTAAGGAAGATGGTGTATTGCCATCGCACGCAACTATAATCCGG
GGGCTGCTCCGCCTGGAGCAGGTATCAGCGAGCGATGCGGGTGTTTACTCCTGTCGGGCA
GAGAGTCACACAGGGTCGAGTGTCACTACTGCTTCTTTAACTGTTTACTCCTTACCGCAC
TTCACACAGATACCGTCCAATTTGACCGCATGGGAGGGAGATGTCGTGTCCATTCCATGT
GAAGCAAAAGGATTGCCAACACCTACAACATTCTGGATTTTGGAAGGAAATGAGGATACT
CTTTTGTTTCCGGAATGTACTAAAAGTAATTCTAGTTTATTGTATCTGGACGGAGCGAAA
GTAGAACACAGTGGAAGGGTTATCTGTGTTGCTTTAAACGCGGCTGGCAGTGTTATGCAA
GAAGCTTATCTAAATGTGTTAAAGAAAACCAATAGTCCATCGAAAGTACATTCTACTGAT
AAAAAGTTTGGTCATAATCGTGATCACGACGTCCGTATGACGGAGTACGAATTTATTCAA
GCAAGGAAATATTTACAACAAAATGTTTTAGTCTTGAAGAGAGTAGAAACTTTGTCTTCG
ACGTCTGTTAAAGTTGTCTGGGACGTTGTGACTGATTACAATGAGTATTTAGAAGGTGTT
AAAATCTGGTATAATGGTACTTCATTGAATTGGCGCAATAGAACCGAAGAACCTGTCTTA
TTGAGCCCTCATCATAGGGATAGTTGTTCTAATGGTTCTCTGATAGACGTAGATAATAGT
GGTTCGTCAAGTTATATTCTATCAGGCTTATTGCCATACACACAATACGATATTTTTCTA
ATGCCATATTACAAAATGTTGCTTGGAAAGCCATCAAATTCAATGACTGGTTATACTGAT
GAGGATGTACCGTCAGCCCCACCCCTAAGTGTAACAGCGGGTGTAATTAACGCAACTTCT
GCTTGGATTCGATGGGAACCACCGCCTGTGCACACTTGGAATGGAGAACTGACGGGTTAT
TTAATTGAGATCCGGTCTGGTGGTACGGGTGGTCGTGTCGTGGGTCAGATGTCTTTAGGG
CCTCGTACACGCGCGGCCGCCGCAAGTTCGTTGAGAGCTGGACAGTACAGCGCCCGTGCT
GCTGCCACTACACGTAAAGGACACGGAGCTTACAGTGCGGCTGTCATAATAGACATGATG
TACATGCATTCCCAGAGACATTATGTCCAAACTGAGCCGCCGAATGACGCTACTATTCCA
CATTTGCTCCAAGAAACTTGGTTGCTTGCATTAGCATTAACATTATTCTCCGTCATTGTA
ATTGGCATAGTTAGTATTTATTACATAAAACGTCGGAATAATATTCAAAGAAAGAAATCA
AATGGTCAATCTATAGTGACAGCACAACAATGTCTGCTGAATAAAGACACGATATGGCTG
AGAGATAGACCGATATTTGCACCTCCAGATTCTACTTTAGATGTAGGTAGTTGTCATCAA
AGTTTATTGCAAGGTGGTCAATCCCCTAATATTTTAAATATTGAGCCAGAATATTGCCTA
CCACAGAATTCAATTCAAGGTTTAGATGCTTCGAGTGTTGATAGAATAAAACGCGGGCCA
CCTGAGCCGTATGCATCCAGCGCTATTTACACTGAACTCAATTTCAAGGACAACACAGAC
ATCGGAGATGCCAGAAGTTGTACCGAAAGACGTTCTCATAACAACAGTATTGTGCGATCT
TGCAATGGCAGCATCCAATATTCTAATGGAGAATGTTCGACTTGTTGCCATAGCACTTCT
AGTAGATCAACCAAGGATTACAGGGAGTTAAGACACGAGAATCCAAACGAGCTAGTAGTT
GAAGACGATAATGCGTCATATCATACTAATAGATCGGGTTCTAAGAGTCAGGACAAAGCC
AAAGTTTGTCCAACAACTGATTTAGAATACGATTACCCACAGTGGCACTGGTTAGGAAGA
GAGAACAGTTTCAAAATTCCCATACAACAGCTCCGTTCGGAGCGCGCCTGTCAAATAAAT
CTGAATGATATACTGCCGCCGCCGTACGAGAGTCCAGAAAACAAAAGCCAGATAAAATAG
Protein sequence:
MVDVGGNECDNTVTGRNQFVYLVFVHLLLIGLNGTNAQNRAPRIKEHPSNTVSGRSEPAT
LRCVVEGRPKPTVQWFKDGFPLPPAEDGHRVLLEDGLLFLRVNRGKKESDEGVYWCVARN
IAGEAASQNASLNVAVLRDDFRVEPRDVQVAAGEPALLECIPPRGVPEPSVHWLKDGQLY
DIEVNGRVKITETGSLKILETLPNDSGLFRCVASNIAGERQSRAAALIVLRRPHFVVKPS
NVTALVGQNVEFNCQAYDNSVKVTWVKEDGVLPSHATIIRGLLRLEQVSASDAGVYSCRA
ESHTGSSVTTASLTVYSLPHFTQIPSNLTAWEGDVVSIPCEAKGLPTPTTFWILEGNEDT
LLFPECTKSNSSLLYLDGAKVEHSGRVICVALNAAGSVMQEAYLNVLKKTNSPSKVHSTD
KKFGHNRDHDVRMTEYEFIQARKYLQQNVLVLKRVETLSSTSVKVVWDVVTDYNEYLEGV
KIWYNGTSLNWRNRTEEPVLLSPHHRDSCSNGSLIDVDNSGSSSYILSGLLPYTQYDIFL
MPYYKMLLGKPSNSMTGYTDEDVPSAPPLSVTAGVINATSAWIRWEPPPVHTWNGELTGY
LIEIRSGGTGGRVVGQMSLGPRTRAAAASSLRAGQYSARAAATTRKGHGAYSAAVIIDMM
YMHSQRHYVQTEPPNDATIPHLLQETWLLALALTLFSVIVIGIVSIYYIKRRNNIQRKKS
NGQSIVTAQQCLLNKDTIWLRDRPIFAPPDSTLDVGSCHQSLLQGGQSPNILNIEPEYCL
PQNSIQGLDASSVDRIKRGPPEPYASSAIYTELNFKDNTDIGDARSCTERRSHNNSIVRS
CNGSIQYSNGECSTCCHSTSSRSTKDYRELRHENPNELVVEDDNASYHTNRSGSKSQDKA
KVCPTTDLEYDYPQWHWLGRENSFKIPIQQLRSERACQINLNDILPPPYESPENKSQIK