New model in OGS2.0 | DPOGS212430  |
---|---|
Genomic Position | scaffold1732:- 62945-67300 |
See gene structure | |
CDS Length | 1896 |
Paired RNAseq reads   | 848 |
Single RNAseq reads   | 1991 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002888 (0.0) |
Best Drosophila hit   | Git (7e-90) |
Best Human hit | ARF GTPase-activating protein GIT2 isoform 5 (1e-79) |
Best NR hit (blastp)   | hypothetical protein AaeL_AAEL009958 [Aedes aegypti] (2e-121) |
Best NR hit (blastx)   | hypothetical protein AaeL_AAEL009958 [Aedes aegypti] (9e-112) |
GeneOntology terms    | GO:0008060 ARF GTPase activator activity GO:0032312 regulation of ARF GTPase activity GO:0008270 zinc ion binding GO:0007525 somatic muscle development GO:0005737 cytoplasm GO:0031252 cell leading edge |
InterPro families    | IPR002110 Ankyrin repeat IPR020683 Ankyrin repeat-containing domain IPR013724 Spa2 homology (SHD) of GIT IPR022018 G protein-coupled receptor kinase-interacting protein 1 C term |
Orthology group | MCL11669 |
Nucleotide sequence:
ATGGTGCAAGCTCTTACAGCTCAAAATGTAAACAGTATTTGGGAGCATTCTTTATTGGAC
ACTTCAGCTCCAAAGCATTTACGAAAGAAACCACAGCCTAAAGATCCTCTCCATCCAATC
AAATCCGAGTTCATATTGGCTAAGCATTTGAGGCTGGCATATGTTCTACGAGCCAGGCGT
GACGAGCCCCCCGGCGAGCTGGGCAGACAGTTACACAGTGCAGTCAGAAGTTCCTCATTA
GATACAGCAATGAGATTGTTAGCCCAGGGAGCCGATCCCAATTACTTTAACCAGGAGAAG
GGAAACACTTGTCTTCATGTAGCGTGCCGAGCGGGACAGCCTGCGCAAGCTGAATTGTTA
GTGGCCTGGGGTGCCGATCCAACTGCCCGGGATAGTATGGGCAATATGCCTGCCGACTGT
GCCAGAGTAGGTGGTCATACGGAGCTGGCGGATCGTATGACGGAGTTGGTGTACGAGTGT
TCAGATAGACTCATCCAGTTCCTGACGGGGGCGAGGCCCGAGCACTCCGCCGGACGACAT
TACATAGTACCTCGGGCGCACGACTCACATGAGATGACGGATGTAGCCAAGGCAGCTCGT
GGAAAACTACAATTGCTCCCCAACCATTTGTTTGAAGAGCTGGTGATGGATATCTACGAT
GAGATAGACCGTAGAGAGACTGAAGCGATATGGCAGACGAGTGCCACGGGGCTAGAACGT
TGTGGCGTGGCGTTCCTTCCTGTGAACCCCGCGCTCTCCGCTCCAAGGAATCAGGGCCGC
CAGAAGTTGGCGAGACTGTCGGCACCTGAACTGGCCGCGCTGTTGAGGGACGTGCTGTTG
GATGCTACCAGGAGACAGAGGATCGCCGCCCTACAACCTAGAGGTCTCAGCGGTCCCTCG
AACCCTCTTCTCTCCGCGACGCATCTCAAACATCTTTCGCAGATGTCAGACGACGAACCC
TTGTACGACTCGGTTGCGTCCGATGAAGACTACGCCGCTCTGGCACCGATAGACCTCGAC
ATGTCCCACCTAGATCCGCGAGCCGGTGAAGTAGTAGCATCCACTTACAACCCCTCGCTA
CCAACCGATCAATCCACATCCGATCCGACCCGGTCCCACTCGCCCAGCCCGGGGCTGAGC
GTGCCCAAGAAGAAAACAGAAATAGAAAGTCTCAAGAAAGAGCTCGACAATCGAGATTCG
ACCATAACGGAACTCAAGAACCAGCTAAAGAATCTGCAGACCATAGTCGAGCAGCTCACC
AAAGAGAACAGCGCGTTGAAGACCAGCAGTGTGGACGACGATCACAGCATGACGTCACAG
ACCTCCATCAACGAGAGCAACAACACACTGGAGTTGTCACCTCAGGAGCGGGGGCGGAGT
CTCGACACGGAACCTCTGACGTTATCCGAGGACGTGGAGTTGAGGCAAGCGGTGAAAACA
CGGCCGGTCAGTATGTTTGAGGCTAGGGAGGGACCAAAGAATAACTGGCAGGTTACTAAA
CACCAGCTAACAAGTATTCCTGGTTTGGAACGCTCATTGACTCAAGGTGCGCTAGAGGGG
GCTTCGGTCCAGCAGGCCCCCTCGGGGGAGGTCCAATTGAGGGCGGAGGCCGTAACGCGC
TGCATACAGGAACTGTGGGCCGCGGCGAGGCTCAGAAGACCACAACTGCCGGACTGCGCC
GATTCCATACGGAGAGCCGTCGCTGATCTGCTGTCGCTGTTCCCGCAGACATGTACGGAC
AGTGCCCTCCAACAAGTCATATCAGAACTGCGGGCGGCCGGTGAAGCGGTGGTCCTATCT
TGCAGCACTAGGGCTCCGCTGGACCAGGTGCGGGCGGCGGCCTACGACCTGGCCAAGGCC
ACCAAACTACTAGTCACGCACTTCACGCCCTCCTAG
Protein sequence:
MVQALTAQNVNSIWEHSLLDTSAPKHLRKKPQPKDPLHPIKSEFILAKHLRLAYVLRARR
DEPPGELGRQLHSAVRSSSLDTAMRLLAQGADPNYFNQEKGNTCLHVACRAGQPAQAELL
VAWGADPTARDSMGNMPADCARVGGHTELADRMTELVYECSDRLIQFLTGARPEHSAGRH
YIVPRAHDSHEMTDVAKAARGKLQLLPNHLFEELVMDIYDEIDRRETEAIWQTSATGLER
CGVAFLPVNPALSAPRNQGRQKLARLSAPELAALLRDVLLDATRRQRIAALQPRGLSGPS
NPLLSATHLKHLSQMSDDEPLYDSVASDEDYAALAPIDLDMSHLDPRAGEVVASTYNPSL
PTDQSTSDPTRSHSPSPGLSVPKKKTEIESLKKELDNRDSTITELKNQLKNLQTIVEQLT
KENSALKTSSVDDDHSMTSQTSINESNNTLELSPQERGRSLDTEPLTLSEDVELRQAVKT
RPVSMFEAREGPKNNWQVTKHQLTSIPGLERSLTQGALEGASVQQAPSGEVQLRAEAVTR
CIQELWAAARLRRPQLPDCADSIRRAVADLLSLFPQTCTDSALQQVISELRAAGEAVVLS
CSTRAPLDQVRAAAYDLAKATKLLVTHFTPS