New model in OGS2.0 | DPOGS212433  |
---|---|
Genomic Position | scaffold1732:- 34210-38783 |
See gene structure | |
CDS Length | 1662 |
Paired RNAseq reads   | 203 |
Single RNAseq reads   | 598 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002891 (2e-141) |
Best Drosophila hit   | CG3326 (3e-87) |
Best Human hit | fidgetin-like protein 1 (2e-117) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC016198 [Tribolium castaneum] (4e-131) |
Best NR hit (blastx)   | PREDICTED: similar to aaa atpase [Tribolium castaneum] (1e-124) |
GeneOntology terms    | GO:0000166 nucleotide binding GO:0000287 magnesium ion binding GO:0005524 ATP binding GO:0016787 hydrolase activity GO:0017111 nucleoside-triphosphatase activity GO:0046034 ATP metabolic process |
InterPro families    | IPR003960 ATPase, AAA-type, conserved site IPR003593 ATPase, AAA+ type, core IPR003959 ATPase, AAA-type, core IPR015415 Vps4 oligomerisation, C-terminal |
Orthology group | MCL13251 |
Nucleotide sequence:
ATGAGTTGCAACACCTTAAACTTAGAAAATATAACTTTGTTAGATAAATTTTCGTTACAG
GAATATAAAGAATCTCTTTCCAAATCTTCCAACATAACTTCGAATTTGTTATCGAAAGAA
GTATGGGATAAAAATACCAATAATTTAGATGAACGTACTATGAATTACATTCTAAGTGCG
AGTAAGGAAGTTCTTAAAAACCCGAATAATGATATATCTAATACATGGAAGTCAGATTTG
AGCAATATCGATCCACTCCGCATCTTCCAGAGCTCTTTACCGAATTGTGATAAATGTACT
TACATTGAAACCAATACTACCAGTACCTCGATAGGCATAAGTTGTCAATGTGATTATAAC
CAGCATTACAATGATAACACCAGCCTCAAGCCACTGCACAGGGAGTCAAGTCAGGATTCC
AGATCATGTGGTGAAAGACTTTTATTCAAACCCACATTCACTCGCCCTCGGGTCAAGAGA
CCCATCGATGCGTCTAAGAGTGTACCAAATTGCAATAGACCCTCCGAAATGGACGTCGAT
CTGAAGCCCGTTCCTACAGATGAAGCTGCTGATGACGAAGAGAGAGCTCACAAGAGTAAC
GTGGCCAAAATAACTTTTAAGACCGCCAAGGAAGCTCTGCTGTCGTCAAACCCAGCTGCC
AGGCGAACACTGGGAGCGTCGAGGAAGGCTCAGGCGAAATTCATTTCACCAATGCTCGGA
GCACAAGAAAAACAGGAGCTCGCGGAACCGGCTGTCGGCGATGATCGGCTTCGGAATATC
GATCCGAAAATGATTGAACTCATAGAAAACGAGATCATAGACAAGGGAACGCCCGTCGGC
TGGGAGGACATAGCCGGTCTAGAGCACGCCAAGTCCGTGATCCAGGAGGCGGTGGTGTGG
CCTCTCCTCAGACCCGACATCTTCACGGGCCTGCGGAGACCGCCGCGCGGTATCCTGCTC
TTCGGGCCGCCCGGCACTGGCAAGACGCTTATAGGTAAATGTATAGCGTCCCAGTGCAAG
GCGACCTTCTTCAGTATCTCCGCCTCCTCGCTGACCTCCAAGTGGATCGGGGACGGGGAG
AAGATGGTCAGGGCGCTGTTCGCTGTGGCGAGGTGCCATCAGCCAGCCGTGGTGTTTATG
GACGAGATCGACTCCCTGCTGAGCGCTCGAGGAGACTCCGAGCACGAGGCCTCCCGCCGC
ATCAAGACAGAGTTCCTGGTGCAGTTCGATGGAACCAACACCGGTGAAGACGAGCGTCTG
TTGGTCGTGGGCGCCACCAACAGGCCGCAGGAGCTAGACGACGCGGCGCGGAGAAGACTC
GTCAAACGACTATACATACCGCTACCCGGCTTGGAGGCTCGCCATCAAATAATTTACAAT
CTGTTGTCCCGCGAGCGTCACAGTCTGTCGTCCAACGACATGCGGCTAGTGTCGGAGCAG
TGCGAGGGTTACTCCGGCGCGGACGTGAGGTCGCTGTGTGCGGAGGCCGCCATGGGACCT
GTGAGGGCCCTCACTGACATCACCTCTATCAGCGCCAGCCAGGTCCGCCCGGTCAATGTT
CAAGATTTCCAATCGGCGCTGCAGAGAGTGCGGCCCAGCGTGTCCCAGGATGACCTCGGG
CAGTACGTCAAGTGGAACGAGACATACGGACACGGAGCTTAA
Protein sequence:
MSCNTLNLENITLLDKFSLQEYKESLSKSSNITSNLLSKEVWDKNTNNLDERTMNYILSA
SKEVLKNPNNDISNTWKSDLSNIDPLRIFQSSLPNCDKCTYIETNTTSTSIGISCQCDYN
QHYNDNTSLKPLHRESSQDSRSCGERLLFKPTFTRPRVKRPIDASKSVPNCNRPSEMDVD
LKPVPTDEAADDEERAHKSNVAKITFKTAKEALLSSNPAARRTLGASRKAQAKFISPMLG
AQEKQELAEPAVGDDRLRNIDPKMIELIENEIIDKGTPVGWEDIAGLEHAKSVIQEAVVW
PLLRPDIFTGLRRPPRGILLFGPPGTGKTLIGKCIASQCKATFFSISASSLTSKWIGDGE
KMVRALFAVARCHQPAVVFMDEIDSLLSARGDSEHEASRRIKTEFLVQFDGTNTGEDERL
LVVGATNRPQELDDAARRRLVKRLYIPLPGLEARHQIIYNLLSRERHSLSSNDMRLVSEQ
CEGYSGADVRSLCAEAAMGPVRALTDITSISASQVRPVNVQDFQSALQRVRPSVSQDDLG
QYVKWNETYGHGA