| New model in OGS2.0 | DPOGS212434 |
|---|---|
| Genomic Position | scaffold1732:- 29310-32425 |
| See gene structure | |
| CDS Length | 2358 |
| Paired RNAseq reads | 239 |
| Single RNAseq reads | 626 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002892 (0.0) |
| Best Drosophila hit | DNApol-eta (2e-113) |
| Best Human hit | DNA polymerase eta (3e-89) |
| Best NR hit (blastp) | DNA polymerase eta [Aedes aegypti] (9e-153) |
| Best NR hit (blastx) | DNA polymerase eta [Aedes aegypti] (2e-144) |
| GeneOntology terms | GO:0003887 DNA-directed DNA polymerase activity GO:0019985 translesion synthesis GO:0003684 damaged DNA binding |
| InterPro families | IPR017963 DNA-repair protein, UmuC-like, N-terminal IPR001126 DNA-repair protein, UmuC-like IPR017961 DNA polymerase, Y-family, little finger domain IPR017061 DNA polymerase eta |
| Orthology group | MCL13962 |
Nucleotide sequence:
ATGGATCAGGAGAACAGGATTGTTGTACTGATAGATATGGACTGTTTTTATTGTCAAGTA
GAAGAAAAATTAAATCCACAATTGAAAGGCAAACCAATTGCTGTCGTGCAATATAATCCC
TGGAGAGGAGGAGGAATTATAGCCGTGAACTATGTTGCTCGAGCCATGGGAGTAACCAGG
CACATGAGAGGTAATGAAGCTAAGCAAAAGTGTCCAGAAATACAACTACCATCGGTGCCA
TGTTTCAGAGGGAAGGCTGATATAACCAAGTACAGGGAAGCGGGCAAAGATGTTGCTAAG
GTCCTACAAAGGTTTACACCCTTATTGGAAAGAGCTTCGATTGATGAGGCATATTTAGAT
ATCACAGACCCGGTGCGGAAGAGAATTCTAAACATTGATGTCAGGGACATAAATTCTAAC
ATGCTACCAAATAATTTTGCCCTCGGTTATGATACCTTAGATTCCTTCATATCTGATGTA
CATAGCTGTGGCCTGTCGTCTATGGAGTTTGATTATGAACACTCAAAACATCTTCTTGTC
GGTGCTCTCATAGTTAGCGAGATAAGGGCTGCGGTATACGCTGAAACTGGCTACCAATGT
TCAGCCGGGATAGCTCATAATAAAATCTTGGCAAAGCTCGTGTGTGGTATGAACAAGCCC
AACAAACAGACAGTGTTACCAAAACATTCTGTTAACATTCTATACAAGACATTGTCACTC
AAAAAAGTAAAGCACTTGGGTGGGAAGTTTGGGGATCACGTCGCTGAAACTCTTAATATT
AGTACGATGGGACAACTACAGAGATTCACGGAAAAGGATCTTCAGGCGAGATTTGATGAA
AAGAACGGTTCCTGGTTGTACAATATTGCCCGCGGCGTTGACTTGGAACCAGTCCAAGCT
AGATTTAACCCTAAAAGTATCGGTTGTTGCAAACAGCTGAGAGGCAAAGCGGCTCTGCAG
GATTTAGTCAGCCTCAGGAAGTGGCTTCGAGATCTAGGCGATGAAATCGAGAACCGATTG
GAACAGGACTCATTAGAAAATAATCGGATCCCGAAACAAATGGTTGTTAGTTTTTCTTTA
CAAGCTTCCAAAGGGAAGAGAGATATAAGTAGTTCAAGGTCTTACAATTTCAGCCCCGAA
GATGAATTATGTGGAGAAATATTTTCGAGTAAGGCCTTGGAGCTAGTGATGGACAGTGCC
GAAGGCTGCAAACCGACAGATGGCGAACTCAACAGGATGTTGAAATCACCGATAACGTTT
TTAGGCATAAGTGTTGGGAAATTTGATGATAATATTGATGCGAAGAAAACGAAAAAGATC
AAAGATTATTTCAGTGCCGGGTCGTCTAAGGATGTGTCACAAACCGATGAAAGCGTTAGG
ATAAAACTTGAGAGATGTGTTGAGAAGGATGGAACCAACGCTGGCAAAGAATACGTTTTA
GAAAAATACTTTGAATCATCTGATGACGTTAGAAAAGAAAATATTACGAGTAAAATAAGT
ACAGAAACAGAACAACGTAAAGAGACGGTATACCAGTCAAGTTTGGACAGACAGGAGTCA
TTTTTTGCAAAATATTTAAACAGTGGAAGATCAAATGTTGCGAATGACAGAACGCCCTGT
ACACGCGCGGCCTGCGGACAAACATTGCACCTTAGTAACGCTGAAGCCAGTAACGACACG
GACTATTCAGGTTCAACAATAAATGAGGAAATTAACAGGAGTATAGCTCTGTTTGAAGAT
GATCCAGATGATGTAACGCGAGTTGTTAATATGAGGCAGCTGTTGAAGACATCGGAAGCG
AAGTTAGAAGATGTGGAGGATGGAGACAGAGCTCAGACAGGAACAGCGCCGATAGAACCT
GAACGAAATAAATCTCCCGATATAAACAGCGTTGAATGCTCTGAATGTGGCAAGACAGTG
TCTTTGGACAAATTCGATGAACACTCAGATTATCATTTAGCACTTAAATTAAGAGAGGAA
ATGAGACAGGAGGTCAGAAGAGAACAGAACAGAACAAAATCTGTTCTGTCAGAAACTAAT
AAGAATTCTCCAAATAAAAAAGAAACACCAGAAAAACAATGCAACAGGAGTGACAATGTA
CCTTCAATAGTCAATTTTTTTACAAAATTCGACAGATCCATTGAAACAAAATTATGTGCG
GAATGTGGAAAGAAAGTCCCCATTAACAAACTCCCTGAACATCTAGATTTCCACGAAGCT
CAGAAATTGAGCAGAGAAATAAACAACCGGTCAAGTGTAGTGAATGTAACGAGTGCTAAA
AGAAAAAGAAAGTCGTCATCTCCAGTAAAAAAAAACAAAGTGCCTTGTAAGTCAATAGAT
CTGTTCTTTAGACAATAG
Protein sequence:
MDQENRIVVLIDMDCFYCQVEEKLNPQLKGKPIAVVQYNPWRGGGIIAVNYVARAMGVTR
HMRGNEAKQKCPEIQLPSVPCFRGKADITKYREAGKDVAKVLQRFTPLLERASIDEAYLD
ITDPVRKRILNIDVRDINSNMLPNNFALGYDTLDSFISDVHSCGLSSMEFDYEHSKHLLV
GALIVSEIRAAVYAETGYQCSAGIAHNKILAKLVCGMNKPNKQTVLPKHSVNILYKTLSL
KKVKHLGGKFGDHVAETLNISTMGQLQRFTEKDLQARFDEKNGSWLYNIARGVDLEPVQA
RFNPKSIGCCKQLRGKAALQDLVSLRKWLRDLGDEIENRLEQDSLENNRIPKQMVVSFSL
QASKGKRDISSSRSYNFSPEDELCGEIFSSKALELVMDSAEGCKPTDGELNRMLKSPITF
LGISVGKFDDNIDAKKTKKIKDYFSAGSSKDVSQTDESVRIKLERCVEKDGTNAGKEYVL
EKYFESSDDVRKENITSKISTETEQRKETVYQSSLDRQESFFAKYLNSGRSNVANDRTPC
TRAACGQTLHLSNAEASNDTDYSGSTINEEINRSIALFEDDPDDVTRVVNMRQLLKTSEA
KLEDVEDGDRAQTGTAPIEPERNKSPDINSVECSECGKTVSLDKFDEHSDYHLALKLREE
MRQEVRREQNRTKSVLSETNKNSPNKKETPEKQCNRSDNVPSIVNFFTKFDRSIETKLCA
ECGKKVPINKLPEHLDFHEAQKLSREINNRSSVVNVTSAKRKRKSSSPVKKNKVPCKSID
LFFRQ