New model in OGS2.0 | DPOGS212436  |
---|---|
Genomic Position | scaffold1732:- 9171-17427 |
See gene structure | |
CDS Length | 1800 |
Paired RNAseq reads   | 953 |
Single RNAseq reads   | 2956 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002894 (0.0) |
Best Drosophila hit   | Dgp-1, isoform B (4e-174) |
Best Human hit | GTP-binding protein 1 (2e-155) |
Best NR hit (blastp)   | GTP-binding protein GP-1 [Glossina morsitans morsitans] (0.0) |
Best NR hit (blastx)   | GTP-binding protein GP-1 [Glossina morsitans morsitans] (0.0) |
GeneOntology terms    | GO:0005525 GTP binding GO:0005575 cellular_component GO:0003924 GTPase activity |
InterPro families    | IPR000795 Protein synthesis factor, GTP-binding IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IPR004161 Translation elongation factor EFTu/EF1A, domain 2 IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal |
Orthology group | MCL13967 |
Nucleotide sequence:
ATGGACAAGAACATGGAATCCCCCAGGACGGAGAGCCCCGTCCCGGAAGTGGAAAGACGG
GAGAGTGAAACAGACTATTCAAGTATTAGAGGGAAAATGATCCTGGTGAGCCCCACAGCT
GATGAATATGATCTGCTGAGGAAGGAACTCCTGGAGAGACTGGAGACAGGGAACGGAGAA
ATTATTTACGACATTGGTCATGGTGAAGACGGTCGCGGTCTGACTGAAGACGAGTACAGC
GCGTCAGTAGCGACCCTGCAGTCCCTGGTGAGCAGCGAGCGGATCTCGTGTGTGGAACTG
AGGCGATGGGACTGCGGAAGCGGGGTGGCTGGACAGTACCTCCTCAGGACGGAGCTGGAT
CACAACGACTTCATGGAGATCAGGGTGGCGGTGGTTGGGAACGTGGACGCCGGCAAGTCG
ACACTGCTGGGTGTGTTAACGCACGGGGAGCTGGACAACGGGCGAGGGTACGCCAGGCAG
AGGCTGTTCAGACACAAGCACGAGGCCGAGAGCGGCCGCACCAGCTCCGTGGGGAACGAC
ATCCTCGGCTTCGACAGCATGGCGATGTCAATATTCGCAATAAACAAGCAGCCAGACATT
GGTCACACAACACTCACTGATAGAATGAGGGTGCTCCGTGAACACCACTCCCTGCTGAGA
GCGCCGACGCCTCACCACGAGAACCGCTCCGCACGAAGGCCAACCAGCAAATGCCTCGTC
CTCCGACCTACCCTCACTTTTATAGCATTTGTGAGGTGTCGTAACGTGGTGAACAAACCG
GAACACGGGGCCCTCGACTGGGTCAAGATCTGTGAGAAGTCGTCCAAGGTCATCACGTTC
ATTGACCTCGCGGGTCACGAGAGATACCTCAAGACGACGGTGTTCGGCATGACGGGACAC
GCTCCCGACTTTGGGATGCTGATGATTGGTGCTAACGCGGGCATAGTGGGCATGACGAAG
GAGCACCTCGGTCTGGCGCTGGCTCTGTCGGTGCCCGTGTTTGTGGTCGTCACCAAAATA
GATATGTGCCCGCCAAACGTTCTACAGGATAACCTGAAGCTGCTGATCAGGATCCTCAAG
TCGTCCGGGTGTCGGAAGGTGCCCGTCATGGTGAAGACCAGGGATGACGTCATCGTCAGC
GCCACCAACTTCGTTTCCCAGAGACTGTGCCCCATATTCCAAGTGTCGAACGTGTCGGGC
GAGAACCTGGAGCTGCTGACCATGTTCCTCAACCTGCTGAAGACGCGCATGCCCTCGCAG
GACGACAAGCCGGCCGAGTTCCAGATAGACGATACGTACTCCGTGCCTGGTGTGGGCACA
GTGGTGTCGGGCACCACGCTGGCGGGGGTGATCCGCCTGAACGACACGCTGCTGCTGGGG
CCCGACCCCCTGGGACGGTTCGCGCCCATCACAGTGAAGAGCATCCACAGGAAACGCATG
AGCGTGGCCGAGGTCCGCGGAGGACAGACAGCCAGCTTCGCACTCAAGAAGATCAAGAGA
TCCCAGATCCGTAAGGGTATGGTGATGGTGTCCCCGGCGCTGGAGCCCCAGGCCTGCTGG
CAGTTCGAGGGCGAGATACTGGTGCTGCACCATCCGACCACCATCTCCTCACGATACCAG
GCCATGGTCCACTGCGGCAGTATCCGTCAGACGGCGTCCATCCTGAGCATGTCCCGGGAC
TGTCTCCGCACCGGGGACAAGGCGCTCGTCCGCTTCCGCTTCATAAAACATCCCGAGTAC
CTGCGGAGAGGACAGAGAATGGTGTTCCGTGAAGGTCGCACCTACATTAATTGTCTATAG
Protein sequence:
MDKNMESPRTESPVPEVERRESETDYSSIRGKMILVSPTADEYDLLRKELLERLETGNGE
IIYDIGHGEDGRGLTEDEYSASVATLQSLVSSERISCVELRRWDCGSGVAGQYLLRTELD
HNDFMEIRVAVVGNVDAGKSTLLGVLTHGELDNGRGYARQRLFRHKHEAESGRTSSVGND
ILGFDSMAMSIFAINKQPDIGHTTLTDRMRVLREHHSLLRAPTPHHENRSARRPTSKCLV
LRPTLTFIAFVRCRNVVNKPEHGALDWVKICEKSSKVITFIDLAGHERYLKTTVFGMTGH
APDFGMLMIGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDNLKLLIRILK
SSGCRKVPVMVKTRDDVIVSATNFVSQRLCPIFQVSNVSGENLELLTMFLNLLKTRMPSQ
DDKPAEFQIDDTYSVPGVGTVVSGTTLAGVIRLNDTLLLGPDPLGRFAPITVKSIHRKRM
SVAEVRGGQTASFALKKIKRSQIRKGMVMVSPALEPQACWQFEGEILVLHHPTTISSRYQ
AMVHCGSIRQTASILSMSRDCLRTGDKALVRFRFIKHPEYLRRGQRMVFREGRTYINCL