| New model in OGS2.0 | DPOGS212411 |
|---|---|
| Genomic Position | scaffold1732:+ 26754-28972 |
| See gene structure | |
| CDS Length | 660 |
| Paired RNAseq reads | 21749 |
| Single RNAseq reads | 63743 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002811 (9e-113) |
| Best Drosophila hit | Qm, isoform D (1e-105) |
| Best Human hit | 60S ribosomal protein L10 (4e-90) |
| Best NR hit (blastp) | ribosomal protein L10 [Manduca sexta] (2e-117) |
| Best NR hit (blastx) | ribosomal protein L10 [Manduca sexta] (6e-119) |
| GeneOntology terms | GO:0006412 translation GO:0022625 cytosolic large ribosomal subunit GO:0003735 structural constituent of ribosome GO:0005840 ribosome GO:0005811 lipid particle GO:0007052 mitotic spindle organization GO:0000022 mitotic spindle elongation GO:0005737 cytoplasm GO:0043025 neuronal cell body |
| InterPro families | IPR018255 Ribosomal protein L10e, conserved site IPR001197 Ribosomal protein L10e IPR016180 Ribosomal protein L10e/L16 |
| Orthology group | MCL11284 |
Nucleotide sequence:
ATGGGGCGCCGACCAGCGAGATGTTATCGGTATTGTAAAAACAAACCTTACCCAAAATCT
CGGTTCTGCCGTGGTGTACCAGATCCTAAGATCCGTATCTTCGATTTGGGTAAGAAGAAG
GCTGCAGTGGACGACTTCCCTCTGTGCGTGCACCTGGTATCAGACGAGTATGAACAGCTG
AGTTCCGAGGCCCTGGAGGCTGGTCGTATCTGTTGTAACAAGTACCTCGTGAAGAACTGC
GGCAAGGATCAGTTCCACATCCGCATGAGGCTGCATCCATTCCACGTTATCCGCATCAAC
AAAATGTTATCGTGTGCTGGAGCTGATAGGCTCCAGACAGGGATGAGAGGTGCCTTTGGT
AAGCCTCAAGGCACCGTAGCTCGAGTACGCATTGGCCAGCCAATCATGTCGGTGCGCTCC
AGCGACAGGTGGAAGGCGCAAGTTGTAGAGGCTCTGCGTCGTGCCAAGTTCAAGTTCCCT
GGCCGTCAAAAGATCTACATCTCCAAAAAATGGGGTTTCTGGTTCATGCTGGCACTGCTC
AACGAACAGCTGCGTGAGGAGGGCCGTCTAGCCAACGACGGATGCAACGTGAAGTACCGC
CCGGAACATGGACCCCTCGACTCGTGGAGGAAGGTCCAGACGGAGATACATAACGTTTGA
Protein sequence:
MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKAAVDDFPLCVHLVSDEYEQL
SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
KPQGTVARVRIGQPIMSVRSSDRWKAQVVEALRRAKFKFPGRQKIYISKKWGFWFMLALL
NEQLREEGRLANDGCNVKYRPEHGPLDSWRKVQTEIHNV