Genomic Position | scaffold4078:+ 4883-10179 |
---|---|
See gene structure | |
CDS Length | 558 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 0 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase [Bombyx mori] (4e-29) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase [Bombyx mori] (1e-25) |
GeneOntology terms    | GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication GO:0005622 intracellular GO:0008270 zinc ion binding GO:0003723 RNA binding |
InterPro families   | IPR000477 Reverse transcriptase |
Orthology group | ND |
Nucleotide sequence:
ATGCAAATTTCAGAAGAACAAACAGGATTTGCGAAGGACAAAGGCACACCGGAACAAATT
TTGAATGTCCGTCAAGTTATCGAGAAAAACCGAGAGTTCAATAGTCCCGTCATTTTATGT
TTTATTGACTACGCTAAAGCATTTGATTGTGTGCAATGGGAAAATCTATGGGAGGTCATT
GGTGATATGGGTACCCCGGAACGCCTAATAGACCTTATCCGCAACCTTTACGCCAACAAC
CAATCCTATGTCAAGCTGGACACCGACTGTTCAAATGTGTTCCAAACTAAGAAGGGCAAG
AGGACGAGGACGACGACGACGTGCGAAGAGATACCCTACGTGCTAATCGCACTGATGATC
GGAGAGAGTCAGATCAAGAAAAAGGTCGTTTCTTTTAATTTCGATTTGACTGTAGCTGTT
AGCCCTAGTAACTTTAACAGCGTCACCGGTATGGGTGGGTGGCCCTATGGGACCTACCCG
TTAAATTCGGGCCTGAAGGGCCCGGGGAAGGATGAGGAAAAAATTGTATTGCTATGTCTG
AACTGCGTTCTTTATTGA
Protein sequence:
MQISEEQTGFAKDKGTPEQILNVRQVIEKNREFNSPVILCFIDYAKAFDCVQWENLWEVI
GDMGTPERLIDLIRNLYANNQSYVKLDTDCSNVFQTKKGKRTRTTTTCEEIPYVLIALMI
GESQIKKKVVSFNFDLTVAVSPSNFNSVTGMGGWPYGTYPLNSGLKGPGKDEEKIVLLCL
NCVLY