| New model in OGS2.0 | DPOGS204818 |
|---|---|
| Genomic Position | scaffold519:+ 10688-14520 |
| See gene structure | |
| CDS Length | 3606 |
| Paired RNAseq reads | 2751 |
| Single RNAseq reads | 7262 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001558 (0.0) |
| Best Drosophila hit | Isoleucyl-tRNA synthetase, isoform D (0.0) |
| Best Human hit | isoleucyl-tRNA synthetase, cytoplasmic (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to isoleucyl tRNA synthetase [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to isoleucyl tRNA synthetase [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006428 isoleucyl-tRNA aminoacylation GO:0016874 ligase activity GO:0005515 protein binding GO:0005829 cytosol GO:0005737 cytoplasm GO:0005625 soluble fraction GO:0004822 isoleucine-tRNA ligase activity GO:0000166 nucleotide binding GO:0005524 ATP binding GO:0008270 zinc ion binding |
| InterPro families | IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR002301 Isoleucyl-tRNA synthetase IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing domain IPR002300 Aminoacyl-tRNA synthetase, class Ia IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding IPR023586 Isoleucyl-tRNA synthetase, type 2 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding |
| Orthology group | MCL14988 |
Nucleotide sequence:
ATGTCGCTGAAAGTTAATAGGGTTCCTGAAAATATTGATTTTCCAAAAGAAGAGGAAAAA
GTTTTAGCGTTTTGGAATGAAATTGACGCTTTTCAAACTTGTTTGAAGCAGTCCAAAAAT
AAACCGAAGTATTCGTTTTATGATGGACCGCCTTTTGCGACAGGTCTACCTCATTATGGT
CATATTTTGGCAGGAACAATCAAAGATGTTGTTACAAGATATGCACACCAGCAGGGATAT
CATGTTGAAAGAAGATTTGGATGGGATTGCCATGGTTTGCCTGTAGAATTTGAAATTGAT
AAAACTCTGGGAATTAAAGGTCCTGAAGATGTGGAAAAAATGGGCATTGACAAATATAAT
GCAGAATGCCGCAAAATAGTCATGAAATATTCAACAGATTGGGAAAACATCATCACTAGA
ATGGGAAGATGGATTGATTTTAAAAATGATTATAAGACCTTATATCCATGGTTTATGGAA
TCGGTTTGGTGGGTGTTTAAAGAATTGTACAATAAAGGTCTGGTTTACCAAGGTGTCAAA
GTGATGCCATTCTCTACAACATGCTCGACACCATTATCCAACTTTGAGGCTGGACAGAAC
TATAAGGATGTAGTTGACCCTGCTGTTGTGGTAACATTCCCTACTGAAGAAGGGTTTTCT
TTGTTAGCCTGGACCACTACTCCTTGGACTCTTCCCAGTAATTTAGCTCTATGTGTGAAT
CCAAAACTTACGTATTTTAAAGTAAAAGAAAAATCCACTGGAAATTGTTATGTTTTGCAG
GAAAATAGATTTCCTGTTATATTTAAGAATGTTGAAAACTTTGATATTCTAGACAAGTTT
TTGGGTGAAAAATTAAAAGGTCTAAAATACACACCCATGTTTGACTATTTTGTTGATAGA
TGCCCCAATGGTTTTCAAGTATTGACTGATGGGTATGTCACTGATGATTCTGGTACTGGT
ATTGTACACCAATCCCCCTACTTTGGTGAAGACGATTTTAGGGTATGTTTGGCGGCAGGA
GTGATCACAAGGGATCAAGAAATGATATGCCCTGTGGATGCCAGTGGCAGATTCACAGAG
CCTGTCAAAGAATTTCTTGGGCAGTATGTTAAGGATGCAGATAAAAACATTATAGCAAAC
CTCAAAAGTCGCAATCGATTAATTCAATCTGGTCAAGTGAAACATAGTTATCCATATTGC
TGGAGATCTGATACACCTCTAATATATAAAGCTGTTCCCTCTTGGTTTGTGAGGGTTGAA
CAGATGAGTGAGAATCTTTTAAAGTCTAGTGAAGCCACATACTGGGTTCCAGAATATGTC
AAAGAAAAACGATTTGGCAACTGGCTAAAAGAAGCTAGAGATTGGGCCATAAGCAGAAAT
AGATATTGGGGAACACCGATACCCCTTTGGATTTCAAGTGATAAACAAGAGGTATTATGT
GTTGGAAGTATTGCTGAGCTAAGTGCTTTAACTGGAAAAGAAATTACTGATCTCCACAGG
GAAAGCATTGATCATTTGGAAATTCCATCATCAAGGCCTGGACAGCCACCTCTTAGAAGA
GTCACTGAAGTTTTTGATTGTTGGTTTGAATCAGGTTCTATGCCCTATGCTCAAAATCAT
TATCCATTTGAAAACAAAAAAGAATTTGATGAAATTTTTCCAGCTAACTTTATTGCGGAA
GGTATAGACCAAACAAGAGGATGGTTTTATACACTAATTGTGTTGTCAACGGCTTTATTT
AATAAACCCCCCTTTAAGAATTTGATCGCTAACGGTCTAATTCTAGCATCTGATGGGCAA
AAGATGTCCAAGAGAAAGAAGAATTATCCAGATCCTTTAGAAGTTGTATCTAAGTATGGT
GCTGATGCTTTGAGGCTATACCTCATTAATTCACCAGTTGTGAAAGCAGACAATCTTCGC
TTTAAGGAGGAGGGAGTGAGAGATGTCATCAAAGATGTCTTTTTACCCTGGTATAATGCA
TTTAGATTTTTAATGCAAAATGTCGAAAGAATTGTTCAAGAAGACAAAGTCAACTACAGA
TTTAATGAAAAAGCTGTTAGGGAAAATGTTATGGATAAATGGATAACATCCTTCACCCAA
TCCCTCTTAGAATTCGTATCCAAAGAAATGGCTGCGTACAGACTATACACTGTTATACCA
CGCTTAACTAAATTCATCGACCATCTCACAAACTGGTATGTGAGAATGAACAGGAAGAGG
CTGAAGGGAGAAAACGGCGTGAAGGATTGCCAAGTAGCTTTGGATACTTTATTTGGAGTT
CTATATGACATGGTTCGAGTCATGGCTCCTTTCACTCCATTCTTAACCGAATTGATGTAT
AAAACCTTGAGGGAACTGTTGGCAGGAAGTTCCTTAGAAAGTGTACACTTCAACATGATT
CCACAGTCAAAGCAAGATTTAGTTGATAAAAATATCGAAAGGGCTGTCCAGAGAATGCAA
GCAGTCATTGAATTAGGGAGAGTTTTGAGAGACAGAAAAACAATTCCCATCAAGTATCCC
CTTCCGGAGATGATTATCATACATCAGGATGCGACTTACTTGGAAGACATTAACTCTTTA
CTCTCCTATGTTCTAGAAGAAATGAACGTTAAGACGGTAGAACTATCGAGTGATAAAGAG
AAGTATGGCGTTACTTTAAGAGTAGAGCCCGACTACAAGGTACTTGGTACTCGCTTGAAG
GGTGACTTAAAAGCCGTAACGCAATCGCTCAAAGACCTTGATAATAGTCAGTGCGAAAAG
CTCATTGCGGATGGTTTTATAGAACTCCATGGCCAAAGAATCGATGTCTCCGAAATAAAA
GTTATATTCCAAGCGAAAGGAAGTGACAAATACGAAGCTCACAGTGACAACGATGTCCTT
ATTTTGTTGAACGTTACCCCCGACCAGGATATGCTGGACGAGGGTTTTGCCAGAGAGATC
ATAAACAGAGTACAAAAGCTAAGAAAGAAAGCTCATTTAGTACCAACAGACGAGGTAGAC
GTCTTTTATACGGTTGATAAAGCTAGTGACATTTTACGCATTATCAACTCTCACCGGGAG
CTTATCGAAAGTACTGTGAAAGCTCCATTAATTGATATTGAAAAATTACCCAAAACCAAG
GCAGTTATTATCCAGGAAACCCAGGAACTCAAAGGTTCGCATTTAAAATTGGTAATCGCT
TGGCGAAAAGAAGTCGAAATGCCCGCAATTCCATGGGCCAATGTAATTCTTAAAGGTCTG
TCACCAAGATATGGATCTACTAGTGGTCAGGGGTGTATCATTTTGAAAGACAAAGACAAC
AAATTTATAGACTTAAAATGTTTACACAAAGAAATCGAAGGCTTGTTCGGAATTTATGGA
ATGAATTACGCGCTGTGGTGTGACGGAGCGGAAGTTAAGAACACCGAAAACTTAAACATG
AAGAATGTTGTCGTTTCTAAAACAAAGCCTTCCGAGTTTGACTCTCAGAGTACACCGTTT
TGTAAATTTTTAAACATTGTCAATGGCAAGAAAAGCGCTACAATATTCTTAGAGAACCCC
GTCGGTAGGGTTACATTAAGTAAGGAAAAGGCTACAGCATTTGTATCTAAATACTGGGGT
GTTTAA
Protein sequence:
MSLKVNRVPENIDFPKEEEKVLAFWNEIDAFQTCLKQSKNKPKYSFYDGPPFATGLPHYG
HILAGTIKDVVTRYAHQQGYHVERRFGWDCHGLPVEFEIDKTLGIKGPEDVEKMGIDKYN
AECRKIVMKYSTDWENIITRMGRWIDFKNDYKTLYPWFMESVWWVFKELYNKGLVYQGVK
VMPFSTTCSTPLSNFEAGQNYKDVVDPAVVVTFPTEEGFSLLAWTTTPWTLPSNLALCVN
PKLTYFKVKEKSTGNCYVLQENRFPVIFKNVENFDILDKFLGEKLKGLKYTPMFDYFVDR
CPNGFQVLTDGYVTDDSGTGIVHQSPYFGEDDFRVCLAAGVITRDQEMICPVDASGRFTE
PVKEFLGQYVKDADKNIIANLKSRNRLIQSGQVKHSYPYCWRSDTPLIYKAVPSWFVRVE
QMSENLLKSSEATYWVPEYVKEKRFGNWLKEARDWAISRNRYWGTPIPLWISSDKQEVLC
VGSIAELSALTGKEITDLHRESIDHLEIPSSRPGQPPLRRVTEVFDCWFESGSMPYAQNH
YPFENKKEFDEIFPANFIAEGIDQTRGWFYTLIVLSTALFNKPPFKNLIANGLILASDGQ
KMSKRKKNYPDPLEVVSKYGADALRLYLINSPVVKADNLRFKEEGVRDVIKDVFLPWYNA
FRFLMQNVERIVQEDKVNYRFNEKAVRENVMDKWITSFTQSLLEFVSKEMAAYRLYTVIP
RLTKFIDHLTNWYVRMNRKRLKGENGVKDCQVALDTLFGVLYDMVRVMAPFTPFLTELMY
KTLRELLAGSSLESVHFNMIPQSKQDLVDKNIERAVQRMQAVIELGRVLRDRKTIPIKYP
LPEMIIIHQDATYLEDINSLLSYVLEEMNVKTVELSSDKEKYGVTLRVEPDYKVLGTRLK
GDLKAVTQSLKDLDNSQCEKLIADGFIELHGQRIDVSEIKVIFQAKGSDKYEAHSDNDVL
ILLNVTPDQDMLDEGFAREIINRVQKLRKKAHLVPTDEVDVFYTVDKASDILRIINSHRE
LIESTVKAPLIDIEKLPKTKAVIIQETQELKGSHLKLVIAWRKEVEMPAIPWANVILKGL
SPRYGSTSGQGCIILKDKDNKFIDLKCLHKEIEGLFGIYGMNYALWCDGAEVKNTENLNM
KNVVVSKTKPSEFDSQSTPFCKFLNIVNGKKSATIFLENPVGRVTLSKEKATAFVSKYWG
V