| New model in OGS2.0 | DPOGS204819 |
|---|---|
| Genomic Position | scaffold519:+ 63740-75932 |
| See gene structure | |
| CDS Length | 1371 |
| Paired RNAseq reads | 180 |
| Single RNAseq reads | 873 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001559 (1e-06) |
| Best Drosophila hit | endophilin A, isoform B (2e-118) |
| Best Human hit | endophilin-A3 (1e-74) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC004801 [Tribolium castaneum] (4e-169) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC004801 [Tribolium castaneum] (1e-166) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0042171 lysophosphatidic acid acyltransferase activity GO:0048488 synaptic vesicle endocytosis GO:0050803 regulation of synapse structure and activity |
| InterPro families | IPR001452 Src homology-3 domain IPR004148 BAR IPR000108 Neutrophil cytosol factor 2 p67phox |
| Orthology group | MCL11893 |
Nucleotide sequence:
ATGGCGTTCGCTGGACTGAAGAAACAAATAAATAAAGCGAATCAGTATGTCACAGAAAAA
ATGGGCGGTGCCGAAGGCACGAAGCTTGATTTGGACTTCATGGAAATGGAGAGAAAAACG
GACGTAACCTGCGAGCTGGTTGAAGAACTACAAATAAAGACAAAAGAATTTCTACAACCG
AATCCAACGGCTAGAGCTAAGATGGCAGCCGTTAAAGGTATCAGCAAACTTAGTGGACAG
GCGAAGAGTAACACCTACCCACAACCAGAAGGAGTCCTAGGAGATTGCATGCTGCTCTAT
GGAAAGAAACTTGGAGAAGACTCGGTATTCTCACAATGTCTGATAGAGATGGGCGAAGCT
TTGAAGCAAATGGCTGATGTAAAATATTCCTTGGATGATAACATCAAGCAGAGCTTCCTG
GAGCCCCTGCACCACTTGCAGACCAAGGACCTTAAAGAAGTCATGCATCACCGAAAGAAA
TTACAGGGACGTAGATTGGACTTCGATTGCAAGCGACGAAGACAGGCCAAAGACGATGAG
ATCAGACAGGCCGAGGAGAAGTTCGCCGAGTCATTGACACTGGCGCAGATTGGCATGTTC
AATCTTCTGGATAATGATGTTGAGCAAGTGGCGCAGTTGTCTTTCTTCGCCGAGGGTCTT
CTGGAATATCATCAGCAATGTACGGAGATTCTCAAAGGACTGGTGTCTACCCTAATGGAG
AAGAAAGAGGAGGCCGTGAACCGTCCCAAAATGGAGTTCGTGCCAAAGACGCTTGCCGAC
CTTCACATCGAGGGCATCCATGACTTGAACCATGGTAGGCGGTTCGGCTCCACTCCGAGC
CTTTCCCGCGCCCAGCCCTGTAGATCCAACTCCTTCGACCTCCTGCCCCCCACCAACGAC
CCCTTAAAGGCCTGGGAGAACCTCCCCCCTCCCTACCACAACCACTTCAAACCGCACCCC
GCACCAAGGATAACTAATGGACGGACAGAGGGCGGATCCCGCGCGAGCTCCCCCGACCAC
AAGCCGCCGGCCAACCTCGACCTGTTCCCGGCAACTACCCAGCGCTCGAACAACGCGTCT
CCGCTTCCGTCGCCGGTCAAGTCTCCAGCGAGGACTCCGATGGTTCAGGCCAAAGGGCCG
TGCTGCACCGCCCTATACGACTTCGACCCCGAAAACCAGGGCGAGCTCGGCTTCAAGGAG
AATGACGTCATCACCCTCATTTCGAAGGTCGACGAAAACTGGTTCGAGGGTTCCGTGAAC
GGGAAGACCGGCTACTTCCCGATCAGCTACGTTCAAGTCAACGTTCCGCTCCCCAACATA
GCTGACAAATACGACGCGGCCACATTGAGAAGACATTGCTACATCAAATAG
Protein sequence:
MAFAGLKKQINKANQYVTEKMGGAEGTKLDLDFMEMERKTDVTCELVEELQIKTKEFLQP
NPTARAKMAAVKGISKLSGQAKSNTYPQPEGVLGDCMLLYGKKLGEDSVFSQCLIEMGEA
LKQMADVKYSLDDNIKQSFLEPLHHLQTKDLKEVMHHRKKLQGRRLDFDCKRRRQAKDDE
IRQAEEKFAESLTLAQIGMFNLLDNDVEQVAQLSFFAEGLLEYHQQCTEILKGLVSTLME
KKEEAVNRPKMEFVPKTLADLHIEGIHDLNHGRRFGSTPSLSRAQPCRSNSFDLLPPTND
PLKAWENLPPPYHNHFKPHPAPRITNGRTEGGSRASSPDHKPPANLDLFPATTQRSNNAS
PLPSPVKSPARTPMVQAKGPCCTALYDFDPENQGELGFKENDVITLISKVDENWFEGSVN
GKTGYFPISYVQVNVPLPNIADKYDAATLRRHCYIK