| New model in OGS2.0 | DPOGS210386 |
|---|---|
| Genomic Position | scaffold113:- 39003-42804 |
| See gene structure | |
| CDS Length | 1179 |
| Paired RNAseq reads | 2209 |
| Single RNAseq reads | 5594 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011604 (2e-104) |
| Best Drosophila hit | CG8635 (2e-69) |
| Best Human hit | zinc finger CCCH domain-containing protein 15 (1e-61) |
| Best NR hit (blastp) | PREDICTED: similar to GA21225-PA [Tribolium castaneum] (2e-130) |
| Best NR hit (blastx) | PREDICTED: similar to GA21225-PA [Nasonia vitripennis] (3e-86) |
| GeneOntology terms | GO:0008150 biological_process GO:0008270 zinc ion binding GO:0003676 nucleic acid binding |
| InterPro families | IPR000571 Zinc finger, CCCH-type |
| Orthology group | MCL13712 |
Nucleotide sequence:
ATGCCGCCCAAAAAAGCTGCTGCAGCCAGCAAAAAGACTGAGGCGAAGAAGAAGGACAAA
GTTATAGAGGATAAAACCTTTGGTCTCAAGAACAAGAAAGGTGCCAAACAACAGAAATTC
ATCCAGCAAGTGGAAAAACAAGTTAAAAGTGGTGGCATTCATCCAGCTAAGCCCATGGAT
GATAAGAAGAAGGATAAAGAACAGAAATTAAAGGAACAGAAAGAACTGGCCATGTTGTTC
AAACCAGTGCAGACTCAAAAAGTTGAAAAAGGTATTGATCCTAAGTCGGTGGTGTGTACA
TTCTTTAAGCAGGGCCAGTGCACGAAAGGAGACAAATGTAAATTCTCACACGACCTTAGC
ATTGAAAGAAAAGCAGAAAAGAGGTCGCTCTATGTAGATATGAGAGATGATGAAGACACT
ATGGACAATTGGGACGAGGATAAATTAAAAGAAGTTGTTGAGAAGAAACATGGGGAAGGC
AACAAACAGAGACCAGGCACCGACATTATTTGCAAGCACTTTTTGGAGGCTGTCGAGAAA
TCTAAATATGGTTGGTTCTGGGAATGTCCGTCGGGTACCAAGTGTATTTATAGACATGCC
TTGCCGCCCGGCTTCGTCCTGAAACGTGATAAGAAGAAGTTGGAGGACAAGAAAAATGAG
ATTTCACTTGTAGATCTCATCGAAAGGGAAAGAGCAGCGCTTGGACCTAATCAGACAAAA
ATAACGTTGGAGACATTCCTCGCTTGGAAAAAGAAGAAAATCAAAGAAAAACAGGAAGCG
TTCACGCAAGCCGAAGAACAGAAGAGAAATGACTTCAAGGCTGGTCGAGCTGTGGGCTTG
TCTGGACGGGAGATGTTCGCCTTCGACCCGGCGCTAGCAGCTGATGACGATGATGATGAA
GCCGTGGACCTGCGGTACTATGATGATGAAGAGGAACAAGACGACACGGAGTACAGGGAC
ATACAACTGGACCTCATCGGCATGGAAGCCGCGGAGGTGGATGGCAGCGGCACTAAAGCG
ACGGAAGACAGGTTGCAGCAGCTGAGTCAAGGGTTAGAGAACGGAGAGAAGCAACCAGCG
AGTGCTGAAGATGGATCGACCGCCGTCCCTATCAATGAGAACCTGTTCCTCGACGAAGAC
CTGGACGAGGAGCTGCAAAATCTTGATCTGGAAGATTAG
Protein sequence:
MPPKKAAAASKKTEAKKKDKVIEDKTFGLKNKKGAKQQKFIQQVEKQVKSGGIHPAKPMD
DKKKDKEQKLKEQKELAMLFKPVQTQKVEKGIDPKSVVCTFFKQGQCTKGDKCKFSHDLS
IERKAEKRSLYVDMRDDEDTMDNWDEDKLKEVVEKKHGEGNKQRPGTDIICKHFLEAVEK
SKYGWFWECPSGTKCIYRHALPPGFVLKRDKKKLEDKKNEISLVDLIERERAALGPNQTK
ITLETFLAWKKKKIKEKQEAFTQAEEQKRNDFKAGRAVGLSGREMFAFDPALAADDDDDE
AVDLRYYDDEEEQDDTEYRDIQLDLIGMEAAEVDGSGTKATEDRLQQLSQGLENGEKQPA
SAEDGSTAVPINENLFLDEDLDEELQNLDLED