| New model in OGS2.0 | DPOGS210313 |
|---|---|
| Genomic Position | scaffold113:+ 28151-30602 |
| See gene structure | |
| CDS Length | 1785 |
| Paired RNAseq reads | 610 |
| Single RNAseq reads | 1471 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011879 (0.0) |
| Best Drosophila hit | CG3790 (1e-150) |
| Best Human hit | solute carrier family 22 member 5 (5e-69) |
| Best NR hit (blastp) | PREDICTED: similar to CG3790 CG3790-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG3790 CG3790-PA [Tribolium castaneum] (2e-178) |
| GeneOntology terms | GO:0015226 carnitine transporter activity GO:0016021 integral to membrane GO:0055085 transmembrane transport |
| InterPro families | IPR020846 Major facilitator superfamily IPR005828 General substrate transporter IPR016196 Major facilitator superfamily, general substrate transporter |
| Orthology group | MCL18331 |
Nucleotide sequence:
ATGGATTTTGACGCCATACTCGAAGATGTCGGAACCTTTGGACGGTACCAGAAATTGGTT
GTCTATTTCATTCTACTGCCAGCAGTCATACCGTGCGGTTTTCACGCGTATGCTCAACTT
TTCATGGCTTCAGATGTGAAGCACTGGTGTAATGTCCCTGATCTTGAATCACTTAATAAC
TTAGACTTGATTAAGAATCTCAGTATACCTCTCGAATTGAAAAACGGAGAATTCGAATAT
TCTCAATGCAACATGTATAAATTGAACTACAGCAATGTTATAGAAAATTACCCGAATATA
GAAACGCCAGTTTTAGCTGAGATTGTTCCATGTATGGACGGGTGGACTTTTGAAACCAAT
CAAACAACCGTAGTTTCGGAGTGGAGTTTAGTGTGCAATAAAGACTTTTACCCAACTCTT
GGTCTCGTGTTACTGGCGGTCGGTGGGATCATCGGAAATTATATATTCGGCTACCTCCAG
GATACCTTTGGAAGAAAGCCGTCTTTCTTTATTTATCTTATAATTGAATCCATTTTCGGA
ATAGCCACCGCATTCGCTCAAAATTATTACATTTGGATTGTATACAGATTTGGAGTCGGA
TTTACAGTACCAGCAATAATGGCCACTCCTTACGTACTAGCTATAGAACTAGTAGGACCT
AAATGTAGAACTTTATGTACCATTCTCTCCAATATCGCTTACTCTTTGGGGCTTATTTTG
CTATCTGCTGTAGTCTACTTAGTTCGTGACTGGCGTCACCTAGCTTTAGCCACCACTATG
CCGTTTCTAGTGTTTTTCCTTTATCTATGGCCAATGCCAGAAAGCCCTAGGTGGCTATTA
GCTAGAGGTCAATTCGAAAAGGCTGAAGTTATTTTAAAGAAAATGGCCAGGATAAATGGA
AAATCTCTACCAGCAAATTACATGGTGCATCTACGACGTAAATACGAATCTGACAAGTTG
AAACAGGACTTAGAAAAAGAAAAGTCCAGAAAATATGGAATCCTAGATCTGTTTAGAACT
CCCAACTTGAGGAAAAAAACGATTATCATCACATTTATTTGGTTCACTAACACCAGCGTG
TATGTGGGTCTTTCGTATTACGCACCTGTTCTAGGGGGTGACGAATATTTGAATTTCTTC
TTAGCTGGTGTGGTGGAACTACCCACATATATGTTTCTCTGGCCATCAATGGAAAGACTT
GGAAGAAGATGGACGCTTTGTATGAGCATGGTTGTAGGAGGAATCGCATGTTTGACAACA
TTTTTAGTTCAACATGAAACAAACGTGACCCTCGCTCTCTATTGCGTCGGCAAAATGGGT
ATCTCCTCAGCGTTCGTGGTGCTGCCACTAATGGCCTCGGAACTGTATCCTACCGTTGTC
AGAGGTCTCGGTATGAGTCTGAGTTCCGTTTTGGGGATGTTAGGACCAATATTTATTCCA
CTAGTTAATTATTTGGGATCCGACATCATGGTCCTACCCCTAATAATTATGGGAGCGTTG
TTAGTAGCTGGTGGCATAGCAAGTTTACTTCTACCAGAGACATTAAATCAGCACTTACCC
CAGACTTTAGAAGATGGCGAAAAGATGGGGTTAGATACCGATTTCTGCTGTAGCCCACCA
GTAAAGGAATCCGGCTCGACAACGAATAAAGAAGACAAAAATAAAAGTTGTAAAAATTGC
AGCGCATTATGTACATGTCAAATGGTAAACGTATCTCTTGCAGAAGACATAGTTACCATT
ATGGATAAGGATGAGGAAAAAGTTGAATTTGTTGTCTTGAACTAA
Protein sequence:
MDFDAILEDVGTFGRYQKLVVYFILLPAVIPCGFHAYAQLFMASDVKHWCNVPDLESLNN
LDLIKNLSIPLELKNGEFEYSQCNMYKLNYSNVIENYPNIETPVLAEIVPCMDGWTFETN
QTTVVSEWSLVCNKDFYPTLGLVLLAVGGIIGNYIFGYLQDTFGRKPSFFIYLIIESIFG
IATAFAQNYYIWIVYRFGVGFTVPAIMATPYVLAIELVGPKCRTLCTILSNIAYSLGLIL
LSAVVYLVRDWRHLALATTMPFLVFFLYLWPMPESPRWLLARGQFEKAEVILKKMARING
KSLPANYMVHLRRKYESDKLKQDLEKEKSRKYGILDLFRTPNLRKKTIIITFIWFTNTSV
YVGLSYYAPVLGGDEYLNFFLAGVVELPTYMFLWPSMERLGRRWTLCMSMVVGGIACLTT
FLVQHETNVTLALYCVGKMGISSAFVVLPLMASELYPTVVRGLGMSLSSVLGMLGPIFIP
LVNYLGSDIMVLPLIIMGALLVAGGIASLLLPETLNQHLPQTLEDGEKMGLDTDFCCSPP
VKESGSTTNKEDKNKSCKNCSALCTCQMVNVSLAEDIVTIMDKDEEKVEFVVLN