| New model in OGS2.0 | DPOGS210018 |
|---|---|
| Genomic Position | scaffold1899:+ 16497-17397 |
| See gene structure | |
| CDS Length | 582 |
| Paired RNAseq reads | 561 |
| Single RNAseq reads | 1373 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | mitochondrial ribosomal protein L49 (5e-29) |
| Best Human hit | 39S ribosomal protein L49, mitochondrial (3e-13) |
| Best NR hit (blastp) | GE17031 [Drosophila yakuba] (2e-31) |
| Best NR hit (blastx) | GE17031 [Drosophila yakuba] (1e-31) |
| GeneOntology terms | GO:0003735 structural constituent of ribosome GO:0005762 mitochondrial large ribosomal subunit GO:0003743 translation initiation factor activity GO:0006413 translational initiation |
| InterPro families | IPR007740 Ribosomal protein L49/IMG2 |
| Orthology group | MCL15533 |
Nucleotide sequence:
ATGGCGACTGTGTGGCGTTCACAGTATGCGTTTGCACGTTTTTTTATTGGAAAAACCGTT
CGGATCCTGAACAACGCCTCTGATTTGGGTGCACGACTTAAACCGGAGTCAATATCGATA
CCGTTCTCTAGAAAGTATTCCAACTACGCGTCCTCTCCGTTTGTTTCTAAAATCCAAGAG
CAATATGAGTTTGAAATAGTAAAAAACCCCCCCGAGTGGGGGTACGTGGAGCGACTTCTG
CCTTTAGAAACGGTTCCGCAGATAAAACCCAAAGAGTCTTATCCTTCAGGATGGATTGCA
CCAAAGGAGGAAGCAAAAAATTTACCATACTATATAGCCCGGAATAAAAATCATCAAATA
CCCATATATCTTGAAATAGGATACAGAGGCCAAAGAAAAATTACTAAAATAAAAAAAATT
GAAGGCGACATCTGGTTGATGAACGACCTCATTAAGGATTATCTTAAAAATAAATGTAAT
CGTTACATAGAAACGAGAGTACACGAAATCGGTAAATTTATAGACGTAAAAGGAGATTAT
GTTAATATTTTAATAGATTGGGCCCATTCCCAAGGGTTTTAG
Protein sequence:
MATVWRSQYAFARFFIGKTVRILNNASDLGARLKPESISIPFSRKYSNYASSPFVSKIQE
QYEFEIVKNPPEWGYVERLLPLETVPQIKPKESYPSGWIAPKEEAKNLPYYIARNKNHQI
PIYLEIGYRGQRKITKIKKIEGDIWLMNDLIKDYLKNKCNRYIETRVHEIGKFIDVKGDY
VNILIDWAHSQGF