| New model in OGS2.0 | DPOGS205033 |
|---|---|
| Genomic Position | scaffold2126:- 21598-22167 |
| See gene structure | |
| CDS Length | 570 |
| Paired RNAseq reads | 67 |
| Single RNAseq reads | 291 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007895 (4e-12) |
| Best Drosophila hit | CG4935 (7e-32) |
| Best Human hit | WD repeat domain-containing protein 83 (2e-42) |
| Best NR hit (blastp) | PREDICTED: similar to wd-repeat protein [Tribolium castaneum] (8e-52) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC014787 [Tribolium castaneum] (2e-52) |
| GeneOntology terms | GO:0005681 spliceosomal complex GO:0016301 kinase activity GO:0000375 RNA splicing, via transesterification reactions GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019775 WD40 repeat, conserved site IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain |
| Orthology group | MCL12106 |
Nucleotide sequence:
ATGGCAGTGTCGGGATCCATAGACAATACGGTTTGTTTTTGGGACGTAGTAAGCAGAAGG
CAGGAGCCTGAACAGATTTTGAAAGACGCTAAAGATACTATAACCTCCGTGCAGGTTACC
GACCACGAAGTTTTGACATCCTCTGTAGATTGTCACATGAGACTATATGATTTGCGCATT
GGCAAGATGTTTTCAGACTACATCGGGCACATTATTACATACGCTAGTATGACTCACGAC
GGTCAGTGCTACTTGCTTAGTTGCGCTGATAGCACAATAAAATTATTCGACAAAGACACC
GGTGAACTTCTCAATACATTCTCGGGACATGAAAGCAAAGACTACATGCTTGAGAACGCG
GTAAACGAGCGCGATAGCCACATCATTTCCGGTTCCGCAAGCGGAGAAATATTCTATTGG
GATTTGATTTCTAGTAATTGTACTCAAAAGCTTACACACATTAAAAACAAGCCGGTGGTG
TCTCTGAGTCATCATCCGACTGCAAATAAACTTTTGACGGCTTGTGAGGACGAGATTAGA
TTATGGGGAGTGCCGACTGTAGAGGAATAA
Protein sequence:
MAVSGSIDNTVCFWDVVSRRQEPEQILKDAKDTITSVQVTDHEVLTSSVDCHMRLYDLRI
GKMFSDYIGHIITYASMTHDGQCYLLSCADSTIKLFDKDTGELLNTFSGHESKDYMLENA
VNERDSHIISGSASGEIFYWDLISSNCTQKLTHIKNKPVVSLSHHPTANKLLTACEDEIR
LWGVPTVEE