New model in OGS2.0 | DPOGS205035  |
---|---|
Genomic Position | scaffold2126:- 3067-14235 |
See gene structure | |
CDS Length | 1734 |
Paired RNAseq reads   | 197 |
Single RNAseq reads   | 481 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001784 (1e-24) |
Best Drosophila hit   | suppressor of hairy wing, isoform A (1e-14) |
Best Human hit | zinc finger protein 782 (1e-19) |
Best NR hit (blastp)   | PREDICTED: similar to zinc finger protein 99 [Tribolium castaneum] (5e-19) |
Best NR hit (blastx)   | zinc finger protein, putative [Pediculus humanus corporis] (7e-26) |
GeneOntology terms    | GO:0006355 regulation of transcription, DNA-dependent GO:0003677 DNA binding GO:0046872 metal ion binding GO:0005634 nucleus GO:0005739 mitochondrion GO:0005622 intracellular GO:0008270 zinc ion binding |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
Orthology group | MCL19897 |
Nucleotide sequence:
ATGTCATGTCTGTGTGTTGGGCGATGTATCCAAGAGGTTAAGGAAGAAAGATTAAAGCAG
TATTATTTAGATTTGCTCAGAGAAATTCCTTTGAATGTAGACCTTCCATCCCCATGGCTC
TGTTGGGAGTGTGTATCCCTGTTACAAAGAGTGGTGGCGTTCAGAGATCAAGTGAAAGAC
TCGTATAGGATACTACAAACTTATACTAAGGAGAATTTCAATGAATGCCTGCAAAGCGAT
GTGTCGAGATCTCCACGGTTGAAGTTGGCCAAGCAATTGTGTATTGATATACCGCCTGAA
AATGTGAAGTTTGCAATTGACGAAGATGAGTTGACTCCGAGGAATAAGAGTTTTAATATA
GACTTGGAACATGAACTCGAAGAGGTCCACACGGTCATATGTGATGTACAGCGAGGACAG
GGGAAGATCACAAACAACGGAGGTCTGTTCTTCAACGAGGATGATCCGATGTGTACCCAA
CACGACGTCAAGAACGAGCCGTGCGACGATGTATTTACTGAGAAAATGAAAATAGAAGCC
GTCGATGAATCGAATTTGACCCTGAGGAGAGAGAGAAAGAAGTTAAATCATAAAATAAAG
CGACCGGAAGTTAAAGATTACTGTGAGAACGGAAGTAATGAAATAATTGAGGTCAAAATT
GAGAATTATGAAGGCAAGGTTTCATTTAGGAGAGAAGACATCTCGGAGAAGAACAAAAAA
GATGTCAAGATAAGTATTGATGAAAACAAGATGGAAGGAGATAACGAAGACACGAAGGAC
AAGGTTACAGACACTAAGTGCGTTAAGAATCAATACTACAAAACTGTGCATCTCTCCTAC
GAGGAGATGCAAGCGGAGAGACAGAAACTGCGCTGCGCGGAGAGTTTCTTGAGCTCTCCG
TATAAATGCGAGTCTTGCATACTGGTTTACAACAACCAGAGGTCGCTGAAGATTCATAGA
GAAAAGAGACATTCAGTCACAGGTAAATATACCTGTTCCATTTGCGACATAAACGTATCA
TCAGCTGATGAATTCACGTCACACTACAGGCGGCACATGAGGACTTCAGCGGCAACACAC
AGGTACCACAAGGAAAAGCATCACTCTAACAAACCGAGGATAGAGTGCGCCGATTGTGAT
AAAACTTTCAGTCATCGAGCCGGGCTAATGAATCACAGGTTGACTTTTCACGAGTATCAG
AACAAGTTCCCCTGCAACGTGTGCAACAAGATATTCAGGTGGAAAACTAGTTTAAAACGG
CATTTGAAGAAACATAATGAGTCTAAGGATAACCGCAGTAAAGCCTTCTGTGCTAAATGC
GACATCGTGTTCTCGTCTGTGTGTTCGTTGCAGCGTCACCTCAGGAACAGTTTGAAACAT
GTCACCAGCGATCAATTGAAGTTCATCTGCGACCACTGCAACCATAGATTTGCTGACAAG
ACGAAGCTGAGAGACCACATTGAAGAGAAGCACCTGTTCAGGACCTACCAATGCCATATC
TGCCATAAGCCGTCCAAGAACAGGGTCGGACTGGAACAGCACATACGAACAGTGCATAAG
GGAAGGCCGAATAACAGGATGTGTCACCACTGTGGCAAAGGGTTCCCCGTACACCTTAAC
ATAAAATCGAAGAGGTATCCTATGTGCAGGAAACGGAAGGAGAACAATCAACCGGATGTG
GCCGTCTTCACACTTCCGGTCCACTTTATGCCGGATAACGGATATGCTATATAA
Protein sequence:
MSCLCVGRCIQEVKEERLKQYYLDLLREIPLNVDLPSPWLCWECVSLLQRVVAFRDQVKD
SYRILQTYTKENFNECLQSDVSRSPRLKLAKQLCIDIPPENVKFAIDEDELTPRNKSFNI
DLEHELEEVHTVICDVQRGQGKITNNGGLFFNEDDPMCTQHDVKNEPCDDVFTEKMKIEA
VDESNLTLRRERKKLNHKIKRPEVKDYCENGSNEIIEVKIENYEGKVSFRREDISEKNKK
DVKISIDENKMEGDNEDTKDKVTDTKCVKNQYYKTVHLSYEEMQAERQKLRCAESFLSSP
YKCESCILVYNNQRSLKIHREKRHSVTGKYTCSICDINVSSADEFTSHYRRHMRTSAATH
RYHKEKHHSNKPRIECADCDKTFSHRAGLMNHRLTFHEYQNKFPCNVCNKIFRWKTSLKR
HLKKHNESKDNRSKAFCAKCDIVFSSVCSLQRHLRNSLKHVTSDQLKFICDHCNHRFADK
TKLRDHIEEKHLFRTYQCHICHKPSKNRVGLEQHIRTVHKGRPNNRMCHHCGKGFPVHLN
IKSKRYPMCRKRKENNQPDVAVFTLPVHFMPDNGYAI