New model in OGS2.0 | DPOGS215971  |
---|---|
Genomic Position | scaffold532:+ 2631-12730 |
See gene structure | |
CDS Length | 2034 |
Paired RNAseq reads   | 1556 |
Single RNAseq reads   | 4589 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000928 (1e-133) |
Best Drosophila hit   | CG5921, isoform A (1e-44) |
Best Human hit | harmonin isoform b3 (3e-27) |
Best NR hit (blastp)   | PREDICTED: similar to harmonin [Tribolium castaneum] (1e-91) |
Best NR hit (blastx)   | PREDICTED: similar to harmonin [Tribolium castaneum] (7e-81) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families   | IPR001478 PDZ/DHR/GLGF |
Orthology group | MCL18419 |
Nucleotide sequence:
GTCGGCGACCAGGTGGTTAGCGTCAACGGCTATCGGGTGGATGACGCGGTGCATGCTGAG
CTGGTTCATTACATCACTTCACAGTCTCGGCTCAAAATTAAAGTTAGACATGTGGGGATG
ATTCCTGTTAAAGATAAGGAGCACGAGGCTCTATCGTGGCAGTTCGTCTCTGAACGAGCG
TCTTTGGCTTCAGATGTGTCCTCATCGCCGACTCTCTGCCATAACACAGAACATTTGACG
GACTTGCGACTGTCAATACTTGTACCACCAAGAGCAAAGCTTGGCTGCGGTATATGTAAA
GGACCGGAATGGAAACCAGGAATTTTTGTTCAATTTGTTAGAGAAGGCGGTATCGCGCGA
GAAGCCGGTTTACGGCCCGGTGACCAGATTATGTCCTGTAATGGCCATGATTTCTCGAAC
ATATCTTTCAACGAGGCCATATCAGCGATGAAAGCAAGCGGTCGACTCGAGCTGGTAGTG
CGTGAAGGCGCTGGTACAGAGCTGGTTTCGCCTGAAAGCTCCGGATATAATAGCTCTGCG
TCATCCGCTGCTGGTGAGAGGAGCCCTGCGCCACCAGTGCCACTAGCGCCGCCAGCAGCT
CTGAGAAGACGACTCGCCAGCGTCGCCGAGGAAGCTGCTGATAGAGCCGATAGGCTAACA
ATGAATCGAATTAAAAGACGAACATGGGACTGTTTAGATTTCGACTGGAAAAATAACGAC
ATTCATAATTTTGACGCACCCTCCGATATCGAGCCAGATTATGACAGTCCTAGTATACCA
AATAACCCTCATACTTATGAAAGCAAATCAAACATTAGAAGTAAATCTAAAACAGACATA
GAAACAACAAAAATACCCAGCCAAATGAATAGGACCATCATAAATTTAACAGAAGATGGC
GCAACTATTCAATGCAGTTACGACAACAACAATTCTAGAAAAGGTCCATTCACTACAAGT
CAAACGAATAGAGAGAACGAAAAGACGATTGTTGTGGAAGTTCATCACATGAACACCGTC
CCATGCTCTAAGACGGTTGGTAATTTCGGTCAAACAAAAAAGGACGTTGAGACGGACGCC
ACCAGCATAACGAGTTCGGCTACACTATCCAGTGCCATCGCTGATGAAATACAGAGGAGG
AAATTAAATAAGAAACCTGATATAGAAAAGGAAATCAAACAAGTCCCGGTTAAGAAAACG
AGCATCCCAAAGGCAATAGACAATGACCAAAAAAAACATCACGACGCCCTGATGGATGAA
TTCAAAAAGGTCCATAGGAAAATGTTTGCAAATCTTGAAGGAAAAAGTGAAGTTAATAAT
AGTGAAAAACAAACAGATAATATGGATCGCCAGTCAACGATTCCTCTTAGAAAAATCGAA
TCAGTGCCAGCAGAATTAATCAACAAGGATAAAGAAACGCCAGAAAAACGGGAGAAGAAG
GCTCCGCCACCGCCTCCGCCGGAGAGGTTGGACGTATGTTACAGCTATTATCTGTTTCAG
ATGCCAATAGAAAATGGACACCATAATCATAATGGAGAACTCATCACAAACAATCACATC
AACGACAATATGAAAAGTCCAGAAATAATGAAAGTGCCGAATTTAAGAAAAGTTGGTTCT
TTAACTCGAATACCAACACCTGATTATAATAAATCGGACAGTCCCGTACAGCTCCGAGTG
AAGACCGTTAAGGAAGAGAATGCTGAAGTAGAATCTTTAGAATCATATAAACTAAAAAAT
CCACTTAACATTCAACCAAAGCCGCCGTCTCATTACTTCATCAAAGCACCTAATGGAACT
GCGACCATGAAGAAACATGTGCGACCAGTATCGGTTACAATAGGGGAATATGTCAACAAC
GTAGGTCGCAAAGAGCCGGCCAAGTTAGACTTCCTAAACGGAGACAAGATAGACGGGCAT
AGAGCAGCTCATGATGAACCTATCACAAGTAGACTTCAATCCGAATTGGCTCTCACATTG
TCTAGATCAAATTTACGTAAAAAGACTGAAGCTTTGGGCGACGGAGGTCGTTAG
Protein sequence:
VGDQVVSVNGYRVDDAVHAELVHYITSQSRLKIKVRHVGMIPVKDKEHEALSWQFVSERA
SLASDVSSSPTLCHNTEHLTDLRLSILVPPRAKLGCGICKGPEWKPGIFVQFVREGGIAR
EAGLRPGDQIMSCNGHDFSNISFNEAISAMKASGRLELVVREGAGTELVSPESSGYNSSA
SSAAGERSPAPPVPLAPPAALRRRLASVAEEAADRADRLTMNRIKRRTWDCLDFDWKNND
IHNFDAPSDIEPDYDSPSIPNNPHTYESKSNIRSKSKTDIETTKIPSQMNRTIINLTEDG
ATIQCSYDNNNSRKGPFTTSQTNRENEKTIVVEVHHMNTVPCSKTVGNFGQTKKDVETDA
TSITSSATLSSAIADEIQRRKLNKKPDIEKEIKQVPVKKTSIPKAIDNDQKKHHDALMDE
FKKVHRKMFANLEGKSEVNNSEKQTDNMDRQSTIPLRKIESVPAELINKDKETPEKREKK
APPPPPPERLDVCYSYYLFQMPIENGHHNHNGELITNNHINDNMKSPEIMKVPNLRKVGS
LTRIPTPDYNKSDSPVQLRVKTVKEENAEVESLESYKLKNPLNIQPKPPSHYFIKAPNGT
ATMKKHVRPVSVTIGEYVNNVGRKEPAKLDFLNGDKIDGHRAAHDEPITSRLQSELALTL
SRSNLRKKTEALGDGGR