| New model in OGS2.0 | DPOGS215973 |
|---|---|
| Genomic Position | scaffold532:+ 16697-22216 |
| See gene structure | |
| CDS Length | 1794 |
| Paired RNAseq reads | 2000 |
| Single RNAseq reads | 5922 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001206 (0.0) |
| Best Drosophila hit | CG7033, isoform A (0.0) |
| Best Human hit | T-complex protein 1 subunit beta isoform 1 (5e-177) |
| Best NR hit (blastp) | chaperonin containing t-complex polypeptide 1 beta subunit [Bombyx mori] (0.0) |
| Best NR hit (blastx) | chaperonin containing t-complex polypeptide 1 beta subunit [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005832 chaperonin-containing T-complex GO:0006457 protein folding GO:0005524 ATP binding GO:0051082 unfolded protein binding GO:0005811 lipid particle GO:0007052 mitotic spindle organization GO:0005875 microtubule associated complex GO:0031122 cytoplasmic microtubule organization |
| InterPro families | IPR002423 Chaperonin Cpn60/TCP-1 IPR002194 Chaperonin TCP-1, conserved site IPR012716 T-complex protein 1, beta subunit IPR017998 Chaperone, tailless complex polypeptide 1 |
| Orthology group | MCL13479 |
Nucleotide sequence:
ATGAGATTATGGAAGTCACACCTTAGGAAAAAATCTCTGTATTGGGAAAAGTTAATTCAA
AACATAAACATGGTTTCACTCAATCCTGTAAGAATCTTGAAAAATGAAGCAGAAGAAGAG
AAAGCCGAAGTTGCTCGGATGTCTAGTTTCATTGGAGCTATAGCTATAGGTGATTTAGTG
AAAAGTACTCTTGGACCAAAAGGCATGGATAAAATTTTAGTCTCGTATGGAAGAAATGCA
GGACAGGTTGAGGTTACAAATGATGGTGCTACTATACTTAAATCCGTGGGTGTTGACAAT
CCCGCGGCCAAAATTCTCGTTGATATGTCAAAAGTGCAGGATGATGAAGTTGGTGATGGC
ACTACATCAGTCACAGTTTTAGCTGCTGAGTTACTTCGAGAAGCTGAAAAATTGATCGAA
CAAAAACTGCATCCTCAGACAGTTATAGCCGGGTGGCGCATTGCTGTTGAAGCAGCTCGT
CAAGCATTGGCTGAAGCTAGTTTTGATCATGAAAAAAGCATGAACGAAGCAGCATTAAGA
GCAGACTTGGAAAATATTGCTCGTACCACTCTGAGCTCTAAAATTTTGTCTAATCACAAG
GAACATTTCACAAAATTAGCAGTAGATGCAGTTCTTCGTCTTAAGGGTTCTGGTAATCTC
AAGGCTATACAGATTATAAAAATTTCTGGAGGTTTATTGGAGGAATCATTTTTAGATGAA
GGATTTTTATTAAATAAAAAGGTAGGAGTCCACCAACCCAAGAAAATTGAGAATGCTAAT
ATATTGATAGCTAATACTCCTATGGACACTGACAAAATAAAAGTTTTTGGTTCAACTATA
AAAGTAGACTCGATGGCTAAAATTGCTGAACTCGAAGTCGCTGAGAAAGAGAAAATGAAG
GACAAAGTGAACAAGATTCTCAACCATAAATGCAATGTTTTTATTAATAGACAGTTGATT
TACAACTACCCTGAACAGCTGTTTGCCGATGCTGGAGTCATGGCTATTGAACATGCCGAT
TTTGATGGAATTGAGCGTCTTGCTTTAGTCACCGGCGGTGAGATAGTATCTACATTTGAT
TCACCTGAAAAAGTTAAACTGGGACATTGCAAACTTATTGAACAGCTCGCACCTCGCTCG
CTCGCACCTCCGCACGCGAGCGCTGAGAGATGCGAGGCGAGCCGCGAGGCGAGCCGCGAG
CGACTATTTAAACTCTCACTTTGTGCTTCGGCTCGTATCGTCCTCATTGGTGATGAATGT
TTAATACGTTTCTCTGGTGTGGAGCTGGGTTCAGCTTGTACCATCGTAATCCGAGGTGCA
ACCCAGCAAGTTATAGATGAAGCCGAGCGTTCCTTGCACGACGCGCTCTGTGTACTCGCT
GCTACTGTCAAGGAACCTAAAGTTGTCTACGGCGGTGGTGCCAGTGAGATGCTGATGGCG
GAGGCTGTGTCTCGTGTTGCTGCACGGACTGCCGGCAAGGAGGCGGCGGCCGCTGAAGCC
TTCGCCGTAGCTCTACGGCGTCTACCTTCCGCCGTAGCAGACAACGCCGGCTACGACAGC
GCAGATCTCATAGCTCGCCTCAGAGCTTCTCACGCACAGGGAGAGAATACTATGGGGCTC
GATATGGAGAATGGCTGCATCGGTGATATGAAGAAGTTGGGTATAACCGAGTCCTATGTG
GTGAAGCGTCAAGTGTTGCTGTCAGCCAGTGAAGCTGCGGAGGTCATTCTACGTGTGGAC
AACATTCTCAAATCGGCACCCCGCAGGCGTGGGCCCGACCGCCGCCCCTGCTAA
Protein sequence:
MRLWKSHLRKKSLYWEKLIQNINMVSLNPVRILKNEAEEEKAEVARMSSFIGAIAIGDLV
KSTLGPKGMDKILVSYGRNAGQVEVTNDGATILKSVGVDNPAAKILVDMSKVQDDEVGDG
TTSVTVLAAELLREAEKLIEQKLHPQTVIAGWRIAVEAARQALAEASFDHEKSMNEAALR
ADLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFLDE
GFLLNKKVGVHQPKKIENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMK
DKVNKILNHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFD
SPEKVKLGHCKLIEQLAPRSLAPPHASAERCEASREASRERLFKLSLCASARIVLIGDEC
LIRFSGVELGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVVYGGGASEMLMA
EAVSRVAARTAGKEAAAAEAFAVALRRLPSAVADNAGYDSADLIARLRASHAQGENTMGL
DMENGCIGDMKKLGITESYVVKRQVLLSASEAAEVILRVDNILKSAPRRRGPDRRPC