| New model in OGS2.0 | DPOGS203696 |
|---|---|
| Genomic Position | scaffold21:- 222945-230974 |
| See gene structure | |
| CDS Length | 2289 |
| Paired RNAseq reads | 2061 |
| Single RNAseq reads | 4923 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003488 (0.0) |
| Best Drosophila hit | patj, isoform B (4e-95) |
| Best Human hit | multiple PDZ domain protein (4e-87) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC001640 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC001640 [Tribolium castaneum] (7e-170) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0007163 establishment or maintenance of cell polarity GO:0016333 morphogenesis of follicular epithelium GO:0005635 nuclear envelope GO:0016324 apical plasma membrane GO:0016334 establishment or maintenance of polarity of follicular epithelium GO:0045186 zonula adherens assembly GO:0045196 establishment or maintenance of neuroblast polarity GO:0045179 apical cortex GO:0005886 plasma membrane GO:0016332 establishment or maintenance of polarity of embryonic epithelium GO:0035003 subapical complex GO:0007043 cell-cell junction assembly GO:0005918 septate junction GO:0002009 morphogenesis of an epithelium GO:0045176 apical protein localization GO:0005515 protein binding GO:0001736 establishment of planar polarity GO:0045494 photoreceptor cell maintenance GO:0034332 adherens junction organization GO:0008594 photoreceptor cell morphogenesis GO:0005875 microtubule associated complex |
| InterPro families | IPR001478 PDZ/DHR/GLGF IPR004172 L27 |
| Orthology group | MCL10710 |
Nucleotide sequence:
ATGCATCTGGGCGTAAATATATCAAATGCTCTCCAACAGTTAGAAAGTGTAAAGACAGCT
GTAGATCAAAGTGATGATCCTAAACTAAAGGCAGCTACAAATGATGACCTTAACCTTCTG
ATTAATCTCTTAGAAAGTCCAATTTTAAAAAGCATTGCCACCTTACATGATTCTGTAGGA
ATGCTTGCCACACAGGTTGCACATCATCCATCTATACTTCCTGAAGATTTTGATATAACA
CCAGCTGGAGATTTAGCATTGCAAGCAAGGAACCTATATGGAGCTCATGAAGGTGAAGAA
GAACAGAGAGTGCCTCAAGTGTCTCCACCTCACAGTCTCGAGTTTGGATCTGGATCTGAC
ACAGAACGAATTCTTGGCCTCGATAATGCTTCTGTTGATTCCAATATGTCCCCTAAGCAG
AACCGTGGATTACTAGAAATGAATAGAAATGATGACTCATTGGTCTCAACGTCTACTAAC
ATTGTAGCTGGTGACTGGGCCCAAGTTGAAATAATTAATTTAGTGAATGATGGAACTGGA
CTCGGATTTGGCATTATAGGAGCCAGAACAAGTGGTGTTATTGTGAAGACAATACTGGCG
GGAGGTGTTGCAGACAGAGATGGCAGATTGAAATCGGGAGATCATATTTTACAAATTGGT
GATGTCAGTCTGATGGAGATGGGTTCAGAGCAAGTGGCGGGTGTCCTTCGTGCTTCGGGG
TCCCGAGTGCGACTGGTGGTGGCTCGTGCTGTGGACCCCGCAGACCCAGCTACCCTAAAT
GCTTCAGCTGCTCCACTAGTGCCCGCTAGATCTGAGGAATCAAGCCCTGAAGCGTTAGAT
CGTTACTTGATGGAAGCTGGTTTTGAACAAGTATTCCACACTCAGCCGACTCCGATAGCC
CTGAACACTAATGTGTCGAGATTTGTTTTCGATAGTTCAATTACCCCTCCTCCCGACTCA
GATGCAGAATCTCCTGAAGTAGACAGATTCACGGTGCAGTTAAAGAAAGATGAAAACGGT
CTTGGGATTACAATCGCAGGATATGTCTGTGAAAAGGAGGAGTTGTCCGGTATTTTCGTG
AAGTCAGTGACCCCTGGCAGCGCTGCCGCACTGAGCGGTAAAGTGAGGGTCAACGATCGT
ATAATAGCTGTTGATGGAGTGTCCCTCGCTGGAAAGTCCAACCAGAGAGCGGTAGACGCT
CTCAAACAGAGCGGAAATGTTGTTACTCTGGAACTTGAAAGATATCTCCGCGGTCCTAAG
TTCGAGCAACTGCAGCAGGCGATAGCTGCCGGCGAGTCGTCGACGGCGCCGCCCGCTCAC
AACCCCTTCCTACACATGCACCGACCTGAACATTCGGACGACATGACGTCACAGACCACA
CACCTCCCACCGCCAGTGGAGATGCCGGTAGAAGAACCCGAGACTCCGTCGGTCCCCGCA
TTCGAGATGCCTCGCACGCAGGAACAGAAAGACGCCATAAAGAGGAAATGGCAGTCTATA
CTTGGTGATGACGTGGAGATTGTTGTGGGTGTGGTGGTACGTGGTGGTGGCGGTCTGGGG
ATATCTCTGGAGGGCACTGTGGACGTGGAGGGAGGGAGAGAGGTTAGACCACATCACTAC
GTACGGTCCGTACTACCGGAAGGACCGGTCGGGAGGGCCGGGGTTCATCGACCCGGGGAC
GAATTACTCGAGGTGAACGGTCACCGTCTGCTGGGTATGAACCACCTGGAGGTGGTGTCG
ATCCTGAAAGAACTGTCCAGCGAGGTGTGCATGGTGTGTGCGAGACCGAGACCAGCGCCG
CCGCTAGACCTCGCGCCGCCCGCGGCTACACTCGTTAAGGCGAAGTCGGATGGCAGTCTA
GCGGGCGCGGGGGCGGAGGACGGGGGGTCATTGACCGCAGGGGGAAAGGTTCGATCAAGG
AGTCTCGAACCACTCACAGGACTAGCGATGTGGGCGTCCGAGCCACAGATTATTGAGCTG
GTGAAGGGCGAACGAGGTTTGGGCTTCTCCATCCTTGACTACCAGGATCCCCTGCGTCCC
TCGCACACCCTGGTGGTGATACGGTCCCTGGTGCCGGGCGGCGTGGCCCAGCAGGACGGC
AGGCTCATACCAGGCGACAGGCTCCTCTTCGTCAATGAACAGAACTTGGAGAACGCTAGT
CTAGAACAAGCCGTCGCTGCTTTAAAGGGCGCCCCCCGTGGCGTGGTCCGTATTGGCGTG
GCGAAGCCTCTACCACTAACCGACGGTCCCCCACCACTACCGGCTACCTCCCCACCACCA
CACCACTAG
Protein sequence:
MHLGVNISNALQQLESVKTAVDQSDDPKLKAATNDDLNLLINLLESPILKSIATLHDSVG
MLATQVAHHPSILPEDFDITPAGDLALQARNLYGAHEGEEEQRVPQVSPPHSLEFGSGSD
TERILGLDNASVDSNMSPKQNRGLLEMNRNDDSLVSTSTNIVAGDWAQVEIINLVNDGTG
LGFGIIGARTSGVIVKTILAGGVADRDGRLKSGDHILQIGDVSLMEMGSEQVAGVLRASG
SRVRLVVARAVDPADPATLNASAAPLVPARSEESSPEALDRYLMEAGFEQVFHTQPTPIA
LNTNVSRFVFDSSITPPPDSDAESPEVDRFTVQLKKDENGLGITIAGYVCEKEELSGIFV
KSVTPGSAAALSGKVRVNDRIIAVDGVSLAGKSNQRAVDALKQSGNVVTLELERYLRGPK
FEQLQQAIAAGESSTAPPAHNPFLHMHRPEHSDDMTSQTTHLPPPVEMPVEEPETPSVPA
FEMPRTQEQKDAIKRKWQSILGDDVEIVVGVVVRGGGGLGISLEGTVDVEGGREVRPHHY
VRSVLPEGPVGRAGVHRPGDELLEVNGHRLLGMNHLEVVSILKELSSEVCMVCARPRPAP
PLDLAPPAATLVKAKSDGSLAGAGAEDGGSLTAGGKVRSRSLEPLTGLAMWASEPQIIEL
VKGERGLGFSILDYQDPLRPSHTLVVIRSLVPGGVAQQDGRLIPGDRLLFVNEQNLENAS
LEQAVAALKGAPRGVVRIGVAKPLPLTDGPPPLPATSPPPHH