New model in OGS2.0 | DPOGS203702  |
---|---|
Genomic Position | scaffold21:- 70847-75782 |
See gene structure | |
CDS Length | 1269 |
Paired RNAseq reads   | 885 |
Single RNAseq reads   | 2482 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003495 (6e-97) |
Best Drosophila hit   | naked cuticle (1e-23) |
Best Human hit | protein naked cuticle homolog 1 (4e-10) |
Best NR hit (blastp)   | PREDICTED: similar to naked cuticle CG11614-PA [Tribolium castaneum] (9e-43) |
Best NR hit (blastx)   | conserved hypothetical protein [Culex quinquefasciatus] (2e-26) |
GeneOntology terms    | GO:0005634 nucleus GO:0005737 cytoplasm GO:0007367 segment polarity determination GO:0008270 zinc ion binding GO:0014018 neuroblast fate specification GO:0060071 Wnt receptor signaling pathway, planar cell polarity pathway |
InterPro families    | IPR018249 EF-HAND 2 IPR011992 EF-hand-like domain |
Orthology group | MCL39753 |
Nucleotide sequence:
ATGACGTGCTACGAAACGCTGAGAGCTTCGGCACCCGCCGCGGACGCCCCCATGGCGCAC
CACTTCGTCAAGTGGTGGCGCAACAAGTTTAGAAATGGATATAAGAAATTCAGCATTGGT
ACTGAAGGTGAACGTACTGATACGGAGGAGTTGGTCGGCCGCGCTGCCTCTCAGTGTTCC
GCGCCACCGGATCTTCTTCCGAGCGAGGCCAGAACGTTGTTACAGTCGGCCACCCCGCCG
CCCCCCGTGCCCGCCAGAAGATATGAACCCTTCACCAAGAGAATACCATCTCCAGATAAA
CCTAATGAAGCTCTAGATGACAAACCGAGACTGAGGTTTGAAGAATTAACATGCGATGTT
GAATTACAACATTCCGAGTCCTCTAAGCAGCAGCCGCTGCAGTTTTCATTCACTCTTTAC
GATCTCGACGGTCACGGACGAATGACTAAAGATGATATAGCCGGTATAGTGTCGACGATA
TACGACTCGATAGGCAAATCGGTGACGGTTCCGCACTATGGATCTAAAACTATACAAGTG
AGACTAACGGTCGTTCCGGAGGACGGGCGGAGGAAGCGGCGGGAGAGGAGGGAAGCGAGA
GAGGGGAGGAATGGCAGGCGGAAAAAAGAAACAGCCGTTAATATACCAGAAAACAGTGAA
GAGGAACATCATGAAAGGCTGTCAAACGAAGAAGACGTCTCCTCGAAATCCTCCTGCTCC
GATGACAGGAGACCGCCTCAAAGACCGCCGCCCGTCCTGCGTCAAAAATCACACAGACAT
CCGAAAAGGGAACTCCGGGAGAGGAAATATGTTAAGAAAAGATCCGGCAGCCTACAACGC
CGGGAATTACTGGAAATTATACAAGCTAACATGGAAAAGAATCATCTGAGCTTTCAAACG
TCTAGAAAGCCCAGCGAGGTCATAGTTAACGAAGAAGATATAGCAAATAAATACCAGAAG
CTTCGGAACAGAGCATACACAGTGACTGAAAAACCAGTTAATGTGATGAAAAGGTCCAAA
CAGGAGTCTCCGAGTCACGGATATCTGGACCTGGCTTGTGGCGGGGACTCAAACTTATGT
AGATACGATAGGTACTTACACGCTGTGATATGTTCCTCAGCGCGTCACGCTCACACTGGT
TACCATCAGAAGCAAACGCAATCATCCAAACATAAAACATCCCACAACCCTAACTCAAGA
TCGAGGTCCCATGACCACCATCAACCACACTCCACCCAACCCAGAGTATTGCAGATAATA
TTCTTATAG
Protein sequence:
MTCYETLRASAPAADAPMAHHFVKWWRNKFRNGYKKFSIGTEGERTDTEELVGRAASQCS
APPDLLPSEARTLLQSATPPPPVPARRYEPFTKRIPSPDKPNEALDDKPRLRFEELTCDV
ELQHSESSKQQPLQFSFTLYDLDGHGRMTKDDIAGIVSTIYDSIGKSVTVPHYGSKTIQV
RLTVVPEDGRRKRRERREAREGRNGRRKKETAVNIPENSEEEHHERLSNEEDVSSKSSCS
DDRRPPQRPPPVLRQKSHRHPKRELRERKYVKKRSGSLQRRELLEIIQANMEKNHLSFQT
SRKPSEVIVNEEDIANKYQKLRNRAYTVTEKPVNVMKRSKQESPSHGYLDLACGGDSNLC
RYDRYLHAVICSSARHAHTGYHQKQTQSSKHKTSHNPNSRSRSHDHHQPHSTQPRVLQII
FL