| New model in OGS2.0 | DPOGS203797 |
|---|---|
| Genomic Position | scaffold21:+ 117880-123758 |
| See gene structure | |
| CDS Length | 2031 |
| Paired RNAseq reads | 1240 |
| Single RNAseq reads | 3898 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003704 (6e-155) |
| Best Drosophila hit | heat shock factor, isoform D (2e-79) |
| Best Human hit | heat shock factor protein 1 (2e-62) |
| Best NR hit (blastp) | heat shock transcription factor [Mamestra brassicae] (0.0) |
| Best NR hit (blastx) | heat shock transcription factor [Mamestra brassicae] (0.0) |
| GeneOntology terms | GO:0003677 DNA binding GO:0003704 specific RNA polymerase II transcription factor activity GO:0009408 response to heat GO:0005634 nucleus GO:0016563 transcription activator activity GO:0005700 polytene chromosome GO:0010552 positive regulation of gene-specific transcription from RNA polymerase II promoter GO:0043565 sequence-specific DNA binding GO:0003700 sequence-specific DNA binding transcription factor activity |
| InterPro families | IPR000232 Heat shock factor (HSF)-type, DNA-binding IPR011991 Winged helix-turn-helix transcription repressor DNA-binding |
| Orthology group | MCL16492 |
Nucleotide sequence:
ATGCGTTCAGTTGTGGAAATCGGGGCAAGTGTCCCCGCTTTTTTGGGAAAATTGTGGAAA
TTATTAAATGATACAGAAACGAATCATTTAATATCTTGGAGTCCCAGTGGAAAGACATTT
GTTATAAAGAATCAAGCTGATTTTGCAAGGGAGCTGTTACCACTATATTATAAACACAAC
AATATGGCTAGTTTCATCAGGCAATTGAATATGTATGGGTTCCATAAAATAACCTCAGTA
GAAAATGGTGGTTTGAGGTATGAAAAAGATGAAATTGAGTTTTCACATCCCTGTTTTATG
AGAGGACATGCATATCTATTGGAACATATAAAAAGAAAAATTGCCAATCCCAAGTCTATA
GTGGCAAGCAGTGAAAGTGGTGAAAAAATTCTTTTGAAGCCAGAAATAATGAACAAAGTG
TTAGCTGATGTGAAGCAAATGAAAGGGAAACAGGAGAGTCTGGATGCTAAGTTCAGTGCG
ATGAAGCAAGAAAATGAGGCGCTATGGAGGGAAGTAGCAATACTACGTCAAAAGCATATT
AAACAACAACAAATTGTTAACAATCTCATACAATTCCTGATGTCGTTGGTCCAACCATCA
AGAGCTCCCAGTTCCACTGGTAACAATGTTGGAGTAAAGAGGCCATATCAATTGATGATT
AATAACGCGGCACATAACTGCGGTGATAGCTCATACCCTGGTAGGCTTAAGAATATTAAA
ATTGACAAGGACATTGCATTGGAAGATTTAAGTGAAGAAAACTTGGAGGATGGGCCCACT
ATACATGAATTGGTACATGACGACACATTGCACAATGAAGTATCTCAGGATTCATTGGAC
GATAACTTTGTGTCGGTTGATTTAGCAAACAACCCACTTATTGCCAACTCACACAATAAC
TCTGATCCAACAACATCCTCTCGGTACCATGTAACAATGGAAGATGGTGAAGACCTAGAA
ACAGATCGTTCAAGATTATCATTGCCTATAGTCAATTCCAATGGTTTATGGAAACGTGAG
ACCCAGCCCATAGTTTCGTCCCCATCCCCTACAATGGCATCTGTGTCTCCAGTAGGTCAA
CAGTCAGCTGAGAATGTTAATGCCCACATAACAATATCACCGGGCACATCAAAGACGAAG
GCTCGAAGCAACTGTAGAAGTATTTTAGCGAACAAAAATGTAATGTCAACAAGCAACTTT
AACTCTATAAACCCATCAGCGGATTTTAAGCTACCAGCTGAGATTTTCGCTAGCGACGAC
TCTGTAAGTGATGTGGCGGCTACAGAGGAAGTTCTGCAGGATCTGGTATGTGATCAGGTC
ATCTCAGCCAAAGACAAGATGTTAGGTGGTGTAAATATAAAAATAGAGAAACCATTGGAC
TGTAAGAGTGGGAAAAAGTCGAAAAAGTCGAAGGATACCAACGACACCTGCTGCTTGAAC
CTAGCCGACATCAAGACTGAATTGCAGGACGACTTTGATTGGAACAATATGACACTTGCC
ACCGTTAATAACTCTAATATTAACAGGCAGCAGACAGTGTATAGGAGAGATAACTGCCAA
AATCGGGAAGATATAACTTCCCTGTTTGGATCAAATTCCAACAAGAACGATATCGACGAT
CATTTGGATTCAATGCAAACGGATTTGGATTCGTTGAAGGAGTTGTTGAGAGGTGATACT
TACGCGTTGGACACAAATACATTATTAGGGCTTTTCGGATCAGATGATCCTTTCTATGGA
CTCTCTTACAATCCGTCGAATGATCGCGCTAAGACCTGCAGTGGCGCTATGAAGCTGAAA
GGTGAGGTAACGAATGTAAGCGGTGACGACACACGCGCACAGAGCCCATTCGAAGATGAC
GCTGAAGGGAATCAGTTAATATCGTATACAGAGAATATTCCAGACTTTGAGGATATAAAT
ATGCCGGAATTGGAGGGCGAGAACTCTCAAGACTGCATCCCGAGTCCCAGCAGCTCGACC
TTGAATACACCACAAGTACAACTGCAGTCACCATCATATACGAGACCTTGA
Protein sequence:
MRSVVEIGASVPAFLGKLWKLLNDTETNHLISWSPSGKTFVIKNQADFARELLPLYYKHN
NMASFIRQLNMYGFHKITSVENGGLRYEKDEIEFSHPCFMRGHAYLLEHIKRKIANPKSI
VASSESGEKILLKPEIMNKVLADVKQMKGKQESLDAKFSAMKQENEALWREVAILRQKHI
KQQQIVNNLIQFLMSLVQPSRAPSSTGNNVGVKRPYQLMINNAAHNCGDSSYPGRLKNIK
IDKDIALEDLSEENLEDGPTIHELVHDDTLHNEVSQDSLDDNFVSVDLANNPLIANSHNN
SDPTTSSRYHVTMEDGEDLETDRSRLSLPIVNSNGLWKRETQPIVSSPSPTMASVSPVGQ
QSAENVNAHITISPGTSKTKARSNCRSILANKNVMSTSNFNSINPSADFKLPAEIFASDD
SVSDVAATEEVLQDLVCDQVISAKDKMLGGVNIKIEKPLDCKSGKKSKKSKDTNDTCCLN
LADIKTELQDDFDWNNMTLATVNNSNINRQQTVYRRDNCQNREDITSLFGSNSNKNDIDD
HLDSMQTDLDSLKELLRGDTYALDTNTLLGLFGSDDPFYGLSYNPSNDRAKTCSGAMKLK
GEVTNVSGDDTRAQSPFEDDAEGNQLISYTENIPDFEDINMPELEGENSQDCIPSPSSST
LNTPQVQLQSPSYTRP