| New model in OGS2.0 | DPOGS203804 |
|---|---|
| Genomic Position | scaffold21:+ 213504-222309 |
| See gene structure | |
| CDS Length | 2073 |
| Paired RNAseq reads | 4185 |
| Single RNAseq reads | 11776 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003709 (0.0) |
| Best Drosophila hit | bubblegum (2e-163) |
| Best Human hit | long-chain-fatty-acid--CoA ligase ACSBG2 (2e-145) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP008596-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP008596-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0004467 long-chain fatty acid-CoA ligase activity GO:0001676 long-chain fatty acid metabolic process GO:0005575 cellular_component |
| InterPro families | IPR000873 AMP-dependent synthetase/ligase |
| Orthology group | MCL11580 |
Nucleotide sequence:
ATGCAGGTCCCAAATGGAGTTGAAAATCAGAAATATTTGAATGGTCCTGACCAAGTAATA
CCAGTGGATCACTACATATGTTGTACTCCGGGCGGACACGTGAAACTGCGTATGGGCTCG
CGGGGAGTCGCTGCAGAGCCTCCGATATCCGTACCAGGTCTACTGAGCAGGACAGTGGCT
AGATATCCGGATGCAACGGCCTTTGCCACAAAAAAATCTGATGGAAAATGGCATAGAACC
ACTTACAGGCAGTACCAGGAACGCGTAAGGACAATAGCAAAGGCCTTTTTGAAAATAGGT
CTCGAACGTTTTCACTCCGTATGTATATTGGGATTCAATTCAGAAGAATGGTACATCGCC
GACCTCGCAGCTATTCACGCCGGAGGTTATGCGGCTGGAATTTACACCACGAATTCTGCT
GAAGCATGTTTCCATTGTCTGGAATCCTCACGAGCGAACATCTGCGCTGTGCAGGACAAG
AAGCAATTAGACAAAATATTGTCCATACAAGGACGCTTGAAGCATCTAAAAGCTATCGTA
CAATGGGAAGGTCCGGTAGACACGTCTGTGCCTGGTGTCTACAGTTGGGATCAGTTGATG
GAGATGGGAGCGAAGGAACCTGACACACAGTTGAACAACATCCTTAAGTCTATTGCCGTC
AACGAGTGCTGCACTCTTGTATACACTTCCGGAACCGTGGGTCCACCGAAAGCGGTGATG
CTCTCACACGACAATCTCACGTGGGATGCATTCGCGATCAGTGAAAGATGCGGTGATTTG
AAACCTACATTAGACAAAATCGTTTCATACTTACCGCTGAGTCACGTTGCCGCACAGGTA
GTCGACATTTATGCAACATTAACAAATGCTATTGAAGTATACTTCGCAAGACCTGATGCC
CTCAAGGGGACGTTGGTTGAAACCTTGAGAGAAGTCCGTCCAACGAGGTTTCTAGCTGTG
CCGCGAGTGTGGGAAAAGATGCACGAAAAAATAATGGCTGTAGGCGCTGCGAACAGCTCC
TTCAAGAAGAGCATAGCAATGTGGGCCAAAGAAAAAGGAACGAAACACCACCTAGCAAGA
ATTAACGGTGCCCTTTCGTCCAGTCCGAGGGTTCTGCCAATAGACTTCAGTCTTTTGGAG
TTACTTAAGTATTGGCAAACGGGTACAACTTGTGGTTATAAACTGGCGAAGTCGCTAATC
TTCAGTAAGGTGCGTGACTCTCTCGGACTTGACCGTTGCCTAACATTCGTAACTGCGGCG
GCGCCACTGTCGCCTGAGATCAAAAAGTTTTTCCTTTCCTTGGACATACCCATCATGGAT
GCCTTCGGGATGAGTGAAGCAGCTGGTGCTCACACACTTAGTATATATCCAAAATTCTCG
CTGGATTCATCTGGAGAAATACTGGACGGAACCGAAACACGATTTGGGGACTCCATGAGT
GTCAACGGCCCTGGTGAAATTCAAATGCGCGGTCGCCATGTTCTCATGGGCTACCTCAAT
GACGAAGAAAAGACGAAAGCCACTTTAGACGAAGACGGATGGTTACACTCTGGCGATGTC
GGAAGATTGGATAGTCACAACTTGTTGTACATCACAGGAAGAATAAAGGAATTATTGATA
ACTGCTGGAGGAGAAAACATAGCTCCTGTTCTCATAGAGCAGGCGGTTCAATCCGAACTG
CTACACGTAGGATATGCTGTGCTTGTGGGAGACAGGAAGAAGTTCCTAGCCATATTACTT
ACTTTAAAGGCCAAAGTGGATTCAAACACCGGTGACGCGTTGGACGAGTTAGACACTGAA
ACAAAGAAGTGGGTGGCGGGTCTTGGTAGCTCTGCCACCACCATCAGTGAAATCGTCAGG
ACCAAGGATCCAGTTGTGTATAAAGCTATAGAAGATGGAATCACTCGTGCTAACAAACAC
GCAATATCGAACGCTCAGAAAGTACAAAAATTCGCTATACTACCCGCAGACTTCTCAATG
AACACCGGAGAACTAGGACCAACATTGAAAATCAAGAGGAACGTAGTATACGAGAAATAC
AAAGACATCATAGAAGACTTCTACAAAGATTAG
Protein sequence:
MQVPNGVENQKYLNGPDQVIPVDHYICCTPGGHVKLRMGSRGVAAEPPISVPGLLSRTVA
RYPDATAFATKKSDGKWHRTTYRQYQERVRTIAKAFLKIGLERFHSVCILGFNSEEWYIA
DLAAIHAGGYAAGIYTTNSAEACFHCLESSRANICAVQDKKQLDKILSIQGRLKHLKAIV
QWEGPVDTSVPGVYSWDQLMEMGAKEPDTQLNNILKSIAVNECCTLVYTSGTVGPPKAVM
LSHDNLTWDAFAISERCGDLKPTLDKIVSYLPLSHVAAQVVDIYATLTNAIEVYFARPDA
LKGTLVETLREVRPTRFLAVPRVWEKMHEKIMAVGAANSSFKKSIAMWAKEKGTKHHLAR
INGALSSSPRVLPIDFSLLELLKYWQTGTTCGYKLAKSLIFSKVRDSLGLDRCLTFVTAA
APLSPEIKKFFLSLDIPIMDAFGMSEAAGAHTLSIYPKFSLDSSGEILDGTETRFGDSMS
VNGPGEIQMRGRHVLMGYLNDEEKTKATLDEDGWLHSGDVGRLDSHNLLYITGRIKELLI
TAGGENIAPVLIEQAVQSELLHVGYAVLVGDRKKFLAILLTLKAKVDSNTGDALDELDTE
TKKWVAGLGSSATTISEIVRTKDPVVYKAIEDGITRANKHAISNAQKVQKFAILPADFSM
NTGELGPTLKIKRNVVYEKYKDIIEDFYKD