| New model in OGS2.0 | DPOGS203274 |
|---|---|
| Genomic Position | scaffold1911:- 12096-20463 |
| See gene structure | |
| CDS Length | 3843 |
| Paired RNAseq reads | 225 |
| Single RNAseq reads | 601 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000454 (2e-172) |
| Best Drosophila hit | RhoGAP100F, isoform C (3e-167) |
| Best Human hit | rho GTPase-activating protein SYDE2 (4e-59) |
| Best NR hit (blastp) | PREDICTED: similar to rho-gtpase-activating protein [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC011933 [Tribolium castaneum] (5e-166) |
| GeneOntology terms | GO:0005096 GTPase activator activity GO:0007165 signal transduction GO:0005515 protein binding GO:0005622 intracellular |
| InterPro families | IPR008936 Rho GTPase activation protein IPR008973 C2 calcium/lipid-binding domain, CaLB IPR001478 PDZ/DHR/GLGF IPR000198 Rho GTPase-activating protein domain IPR000008 C2 calcium-dependent membrane targeting |
| Orthology group | MCL16555 |
Nucleotide sequence:
ATGATCATAAAAAAGGAAAATGGGCGCGCGGCGCCGGACTTGACGGCATCGCCGGGACGC
GCGCCGCCCGGCCCGCCGCAGCCGCCCCGCGCCAACCACGCGCCGCCCTGCGTGCTGCAG
CCAGACTTCCGCAAGGTATCGGGTGTCAGTAATGAAATATTCAGGCAAATTGAGATGGTG
GAAAACGATCACGACACCACCACTGCAGCGGCGCTTGAGGCGGTGGAGCGACGCGGTGAG
ATGATTGTACGAATTCTTGAATTGAGACAAGTCGGAAGAAATAATGTTGAAGCCGCCAAA
AAATTTTTTTCCTTACAAGATGCACGTCACATAGTTCAACTAGTGGAGATCGTGAAGCGC
CCTGGTCAAACCTTGGGCCTTTATATACGAGAGGGAGACGGTGGTGCTAGGACTGATGGA
GTATTCATATCACGAATAGCTCTCGAATCAGCGGTATATAACAGTGGATGTCTAAAGGTT
GGGGATGAAATCCTGGCTGTCAACCTGGTGGATGTAAGACGCATGTCTTTAGACGATGTC
GTGATTATTATGTCTATACCCCGCAGGCTTTTATTGTGCACTAGACAGAGAAAAGGAAAA
TCAGGCCCTGGTTCACCATCATTACCCAGATCTGAGCACAAACCACCTCCTGTTGTTGTT
TTGAAAAGAGACTGCCGGGACGATGACGACCACGATAGAGTTGATGGACTTTATTCGCAA
CATGGTACCTTACGTTCAACGGGAGGTCCTGGAAGTTCTGTGAGACCAGTTGGGGATGGT
AGAGAAGAAAGGAGTCGTTTACAACTTGGTGCATTATCACCAGATTCCACTCCACTTGAT
CTATATTACAATTCACGACCACCCTCCGATCATGCTACGTGGAGTTATCGGCCACCTCCG
CCAGTTATTACGGAGCAACCTAAATCTACTGCAACACATTTTGTGCCATATGAAAGGTCT
TATCCGAATACATTGGAAAGTCTAGCGGAAAAAGTTCATTCCTTTTACCCATCGGAGACT
GGAGGCAGCAGTATGCGGTTTGGTGGAAGAGTTCCACGTTCTGGTTCTGAGCAACAGCTC
CCAAGGGCCGAAACTCATTCTGACTTTGGCCGTCATTCACTGCTTCGGTCTAGTTTGAAA
GCGTCAACTGCTGCAGGGCCAGGAGCTTCCAGTTTGACAAGATATGGACAACGTTACGGT
GGAGTAGGAATGCCAGGTTCAGGATTACCTGGTAGTGGACTCACTGGCACGGGACTAGGC
GGTACTGGTTTAAGTGGTTCAGGATTGCCTTCAGGGTTTTCTGCTACTGGCCTCAGTGGT
TTGACTGGTTCCAGTTTAGTAGGGTCAGGTTTGGCAAGTTCTGGTCTTAGCAGTACGCTC
ACAGGAACTGGCCTAAGTTCAACACTTGGTGCAGGTTATGGCACTACAGGGCTAGGACTA
CCGTCATATGGAAGTAAATTTGGAACGACTAGAAGAAATCGAAGCTTGGATTACTCTTCT
GATACTGAGGCAACAGCACCCACTAGAACTCCTTATTACTCAGGCTTGAGTGGTTACAGG
AGTAGTACTTTAGGAAGGGACATAGGATCGAAATTTAATTCTTTACCAAGAGATGTCAGA
GGAACTGGTCAAAGACTGGGACTAACTAGACGCACAGGGAGTGTACTTCAAGATGAACCT
GAACCGTTGTCTTCACGATTAGACTTACGTTCCTCCAGAGGTCGCCTGCCTTCCTCTCCC
TCAGTATTTACATCAGATGAATATCGCGCATGGTTATCTCGAGCTCCATCAACAAGTGCA
TTGTATGAAACACTTCGTCCTCGACTGCCTACACACTACTCAGCGGAAAATATACATGAT
GCGCTTAAGAATATGGAAAGTGGAAGTCGCTTTGGATCTTCTCTCGGCTTAGCTGGAAGG
CGAATTGAAAGGCCTCGTCATTTACCAGCTAGATCGTTATCATCGCAACAGTTGGGACCG
ACAGCAAGCGGATCACCATCAGCTCGTCGTGTGAGACAGCTTCTTGAGTTGGGATCAAAA
TTTACATGCCCAAATCCAAGTCCTGTACCAACACCAGGTTCAAGACATCAACGACATCTG
GATATAAACCCGAATGAGTTCCTAAAATATAAAGTGGATAAACCCGGTCAAGGAGGTTTA
TCATCGTCTATGACGGGTTTGTCTCGGCTCTCTGGAGGTGTCTCTGGTATGCTCTGGGTC
CACCTTCTTGCTGGTAGAGGGTTGCGTCCAGCTCCTACTGGTTCCTCACCAGGCTCACCA
CCTTCAGGACCCCTTGCGCCACCACAACCTCCAGTAGCACCTCGTGATCTATATTGTGTC
TTAGAATGCGATCGCGTACATAAAGCTCGTACAGTGGTTCGCACTGGTGAGTTGCAGTTT
GATTGGGATGAGTCCTTTGAATTGGAGTTGGTTGATAACAGACAGCTAGATGTACTCGTG
TATTCCTGGGATCCACAACACAGGCACAAACTTTGCTTTAGGGGAGCTGTGACTTTACCA
GATTTATTAGCTCGTTCGCCATTTCATCAACTTGCTATAAAGATGGAACCGCGCGGGACG
CTATACATGCGAGTCCGTCATACTGAACCACACGAGTTATTCCGTCGCCGCGTAGCGCCT
TCTCGCATAGCTCCAGCACCGTTGTTTGGGGCTGAGTTAGAAGCAGTTGTGGCACGGGAA
TTGCGACCACCTCACGCACCACCTGTACCGTTGGTGGTAAGACGTTGTGTTGAAGAAATT
GAGAGACGAGGCTTGGACATTATTGGACTCTATCGCTTATGTGGTTCTGCTAACAAAAAG
CGTATACTTCGTGAGGCATTTGAGCGTAACGCACGTGGTGTTGAGTTGACACCGGACTCA
GTTCCTGATATTAACGTGATTACTGGAGTATTAAAGGATTATTTGACCGAATTGCCACAA
CCTCTTATCAGCCGCTGTTTGTATCAAATGACGTTGGATGCTTTAGGCGTTTGTCTTCCC
GATGATAAAGAAGGCAATGCTCGTCTCATGGCCTCTATAGTGGAATGTCTTCCACGAGCC
GCAAGAGCTACTTTGGTCTTCCTGCTTGATCATTTAGCATTAGTTGTGGCTGCTCAAGAT
CGTAATAAAATGTCACCTCAGCATTTGGCTGTTGCTATGGCACCTCCATTAATGTTACAT
TCCCAGCCACCAGCGGAATTAGATTATCAGCGTCCAATACATGTACTCCAATGTCTTCTT
CAAATTTGGCCTCCACCGAAACGTTCAGGCCGAGCTCCGCCCTCAGTCAGTCCATATCGG
CATCAAGCGGCAGCATCAGCAGCATCTCCGCCGCCAGCTCTCTCGGGTCGTCCCGGAGTC
GACCGCTCGCCGCCCGCACATGTTCTCTCATCAGTCAGGGGAGGCCAATATCGTCCGCAG
TCGCCTCTTCGCGGCCCTCTGCCCGCTCCTCCTCGCTCCCGACAGGTGACGGTGTCATCT
CCCGGCTCCCCCAGCAGTAGCTCCGGGAGCCACAGCCCAGCTGACACGATAAAGCATGGC
GGCTCTGTGTCATCAATACTACGTCAACCGGAACGCGCGAGCTCTCCTCGCGTATCACCC
AGACAATCACCTCGCGCATCTCCTCGGGATTCTCCGCGCGGGACACCAAGGGAGACTACG
CCCCGGGAATCTCCTCGGCCTGCTATACCAGGAACGTCGGCCGGTCTGGCCGTGACTCTG
AATTCCGAGCGGGGTTCGAGTCCACGCTACAGCTCCACCAATCCATTTCTGCAGCAGTAT
GATGCTGAGGAGGAGGCGGAGGCGTGGCGCGCTGCAGACATATTCTCATCCACGCACACA
TAG
Protein sequence:
MIIKKENGRAAPDLTASPGRAPPGPPQPPRANHAPPCVLQPDFRKVSGVSNEIFRQIEMV
ENDHDTTTAAALEAVERRGEMIVRILELRQVGRNNVEAAKKFFSLQDARHIVQLVEIVKR
PGQTLGLYIREGDGGARTDGVFISRIALESAVYNSGCLKVGDEILAVNLVDVRRMSLDDV
VIIMSIPRRLLLCTRQRKGKSGPGSPSLPRSEHKPPPVVVLKRDCRDDDDHDRVDGLYSQ
HGTLRSTGGPGSSVRPVGDGREERSRLQLGALSPDSTPLDLYYNSRPPSDHATWSYRPPP
PVITEQPKSTATHFVPYERSYPNTLESLAEKVHSFYPSETGGSSMRFGGRVPRSGSEQQL
PRAETHSDFGRHSLLRSSLKASTAAGPGASSLTRYGQRYGGVGMPGSGLPGSGLTGTGLG
GTGLSGSGLPSGFSATGLSGLTGSSLVGSGLASSGLSSTLTGTGLSSTLGAGYGTTGLGL
PSYGSKFGTTRRNRSLDYSSDTEATAPTRTPYYSGLSGYRSSTLGRDIGSKFNSLPRDVR
GTGQRLGLTRRTGSVLQDEPEPLSSRLDLRSSRGRLPSSPSVFTSDEYRAWLSRAPSTSA
LYETLRPRLPTHYSAENIHDALKNMESGSRFGSSLGLAGRRIERPRHLPARSLSSQQLGP
TASGSPSARRVRQLLELGSKFTCPNPSPVPTPGSRHQRHLDINPNEFLKYKVDKPGQGGL
SSSMTGLSRLSGGVSGMLWVHLLAGRGLRPAPTGSSPGSPPSGPLAPPQPPVAPRDLYCV
LECDRVHKARTVVRTGELQFDWDESFELELVDNRQLDVLVYSWDPQHRHKLCFRGAVTLP
DLLARSPFHQLAIKMEPRGTLYMRVRHTEPHELFRRRVAPSRIAPAPLFGAELEAVVARE
LRPPHAPPVPLVVRRCVEEIERRGLDIIGLYRLCGSANKKRILREAFERNARGVELTPDS
VPDINVITGVLKDYLTELPQPLISRCLYQMTLDALGVCLPDDKEGNARLMASIVECLPRA
ARATLVFLLDHLALVVAAQDRNKMSPQHLAVAMAPPLMLHSQPPAELDYQRPIHVLQCLL
QIWPPPKRSGRAPPSVSPYRHQAAASAASPPPALSGRPGVDRSPPAHVLSSVRGGQYRPQ
SPLRGPLPAPPRSRQVTVSSPGSPSSSSGSHSPADTIKHGGSVSSILRQPERASSPRVSP
RQSPRASPRDSPRGTPRETTPRESPRPAIPGTSAGLAVTLNSERGSSPRYSSTNPFLQQY
DAEEEAEAWRAADIFSSTHT