DPGLEAN01908 in OGS1.0

New model in OGS2.0DPOGS212522 
Genomic Positionscaffold2044:+ 14754-19222
See gene structure
CDS Length888
Paired RNAseq reads  642
Single RNAseq reads  1807
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA009791 (9e-91)
Best Drosophila hit  Start1, isoform B (6e-18)
Best Human hitstAR-related lipid transfer protein 3 isoform 1 (8e-21)
Best NR hit (blastp)  carotenoid-binding protein [Bombyx mori] (2e-108)
Best NR hit (blastx)  carotenoid-binding protein [Bombyx mori] (1e-105)
GeneOntology terms












  
GO:0008289 lipid binding
GO:0005737 cytoplasm
GO:0006629 lipid metabolic process
GO:0015485 cholesterol binding
GO:0016020 membrane
GO:0016021 integral to membrane
GO:0008203 cholesterol metabolic process
GO:0006694 steroid biosynthetic process
GO:0006869 lipid transport
GO:0006839 mitochondrial transport
GO:0031902 late endosome membrane
GO:0005768 endosome
GO:0008202 steroid metabolic process
GO:0017127 cholesterol transporter activity
InterPro families
  
IPR002913 Lipid-binding START
IPR023393 START-like domain
Orthology groupMCL11042

Nucleotide sequence:

ATGGCATCGAGCTCGGAAAATGTCGATCAAAAGGAGGTAGAAATAGAAAAGCATATTCAA
CAGCTAGAGAATGTTGGAACTGAAGAAGAATTAGAGAAGAAATTGAACAGTATGAATAAG
TTTGGTTTCTCTGTAGCGAATTGGATGAAGATTCTGTTCAACAGAGAGAGTACTGAACCT
TTTAAAGCCGAATGGCTGACTATAGATGAATACAAACAGATGGCAGAGGAGAGTATGGCG
AACGCCTGGAACACTATCAACCTGGAGGACTGGAGGCTGGAGAAGCGAGGTTCAGTTAAA
GGAGACGTGGTCGAGTCGAAACAGACCGAGCAGTTCGGGAAGGTTTACAGGTTTACGGGT
ATGGTCTCTTGCCCAGCAAAATTTCTGTATGAAGAATTCAAAACGAACCTCACAAAGCTT
CCGGAATGGAATCCGACAATATTGAAGAGCGAATTGATCAAGGAAATCGGGCCGGGCATC
GATCTGTCCTACCAAGTGACAGCCGGCGGTGGCCGGGGTATAATTGCGCCCCGCGACTTC
GTCATACTCAGACGGACGGCCGCCCTTAATAAGATGGGGAAATTGGACGATAATGACCCC
TACTGTTATATTAGCAGTGGGGTCAGTGTCACTGTGCCGGGATACCCGCCATGCAATGAT
CTGGTTAGAGGTCACAATAAAGTGGGCTGCTGGCGCATGACTCCCAAGATGGTGGAAGTA
AATAATAAAATGGAGCAACAAACTGTCTTCCAATGGCTGATGTGCTGTGACCTTAAAGGT
AAAATACCCCAATTTGTGCTGGATGCGGCCTTCGCCTCAGTGATGTTGGACTACATCATA
CATGTCAGAAAATATGCAGCGGAAAGCAAAGCCAAGGGACTCTTCTAA

Protein sequence:

MASSSENVDQKEVEIEKHIQQLENVGTEEELEKKLNSMNKFGFSVANWMKILFNRESTEP
FKAEWLTIDEYKQMAEESMANAWNTINLEDWRLEKRGSVKGDVVESKQTEQFGKVYRFTG
MVSCPAKFLYEEFKTNLTKLPEWNPTILKSELIKEIGPGIDLSYQVTAGGGRGIIAPRDF
VILRRTAALNKMGKLDDNDPYCYISSGVSVTVPGYPPCNDLVRGHNKVGCWRMTPKMVEV
NNKMEQQTVFQWLMCCDLKGKIPQFVLDAAFASVMLDYIIHVRKYAAESKAKGLF