New model in OGS2.0 | DPOGS212523  |
---|---|
Genomic Position | scaffold2044:+ 24118-24762 |
See gene structure | |
CDS Length | 645 |
Paired RNAseq reads   | 236 |
Single RNAseq reads   | 1324 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009792 (2e-14) |
Best Drosophila hit   | histone H1 (8e-07) |
Best Human hit | ND |
Best NR hit (blastp)   | histone H1 [Bombyx mori] (6e-29) |
Best NR hit (blastx)   | histone H1 [Bombyx mori] (2e-14) |
GeneOntology terms    | GO:0005634 nucleus GO:0003677 DNA binding GO:0006333 chromatin assembly or disassembly |
InterPro families    | IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR005818 Histone H1/H5 IPR005819 Histone H5 |
Orthology group | MCL25346 |
Nucleotide sequence:
ATGTCCGAGGAATCTGATGTTGAGATGAAATCAGCGCCCATGAGGTCCAAGAGACCACCG
GCCAGCCCGACCGCTGACACGCTTAAAGAACCAAAGAGGCTAACAACCAAGGAGATGATA
AAAGAGGCCTTGACGGAACTAAGAAGCAGGAAGGGGACGTCTCTGTTCGCCATCAAGAAG
TACCTGGAGCTCAAATACAACGTGGACGTGGAGAAAATAAAACATATCATAAAAAAATAC
ATCAAAACCAGCGTCGAAGATGGGACTATAGTGCAGACTAAAGGTGTCGGCGCGTCCGGT
TCATTTAAATTAGTCGAAAAGGAAAAGAAAGAAAAGAAAGTCAAGAAAGACAAAAAGGAG
AAAAAAGGCAAAGTGACTGAGAATAAAGAAAATGCAGACAAAAAGATTAAGCCGAAAACT
AAGAAAGAATCCAAAGATAAAGACGATGGAACAAAAAAAGTCAAAATAGATACGAAAAAG
AAAAAAGAAAAAAAGGAAACAGTCAAGGGAACGGTCAAAGAGAAGAAGACTGATAAGGTG
GTGAAGACGCCAGCCAAGAAGAGAACCGCCATGATGAAGAGGAAGAGCATCGGCTCCATC
ATCAAGCCGCCCAAGATGAAACCAGCTAAGGCAATTAAGGGTTAG
Protein sequence:
MSEESDVEMKSAPMRSKRPPASPTADTLKEPKRLTTKEMIKEALTELRSRKGTSLFAIKK
YLELKYNVDVEKIKHIIKKYIKTSVEDGTIVQTKGVGASGSFKLVEKEKKEKKVKKDKKE
KKGKVTENKENADKKIKPKTKKESKDKDDGTKKVKIDTKKKKEKKETVKGTVKEKKTDKV
VKTPAKKRTAMMKRKSIGSIIKPPKMKPAKAIKG