| New model in OGS2.0 | DPOGS212525 |
|---|---|
| Genomic Position | scaffold2044:+ 40234-48052 |
| See gene structure | |
| CDS Length | 1215 |
| Paired RNAseq reads | 487 |
| Single RNAseq reads | 2800 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009794 (5e-43) |
| Best Drosophila hit | Aspartyl-tRNA synthetase (2e-56) |
| Best Human hit | aspartyl-tRNA synthetase, cytoplasmic (3e-42) |
| Best NR hit (blastp) | PREDICTED: similar to Aspartyl-tRNA synthetase CG3821-PA [Tribolium castaneum] (3e-66) |
| Best NR hit (blastx) | PREDICTED: similar to Aspartyl-tRNA synthetase CG3821-PA [Tribolium castaneum] (1e-63) |
| GeneOntology terms | GO:0006422 aspartyl-tRNA aminoacylation GO:0004815 aspartate-tRNA ligase activity GO:0040007 growth GO:0003676 nucleic acid binding GO:0005737 cytoplasm GO:0005524 ATP binding GO:0005875 microtubule associated complex |
| InterPro families | IPR016027 Nucleic acid-binding, OB-fold-like IPR012340 Nucleic acid-binding, OB-fold IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like |
| Orthology group | MCL11418 |
Nucleotide sequence:
ATGTCATATGGGACACCGACGTTGTATATCAAGTGGCAATTGAGTCAAAAGTTGATAAAA
ATGGTTGCATCAGATGATACCAAGCCGACAGTGGAAGGAGATGCTGGCGGAAGCAAAAAG
GCAGCGAAAAAAGCGGCAAAAGCAGCAGAGAAACAACAGAAAAAGGCCGAGCACAAGGCC
TCTTCAGTCCAGAATGAAGTCCAGGATGAGAAGGACATATCCGAAGGAAGATATGGAATC
ATGAAGCTGATACAATCAACGGGAGAGAATAGAGACAGGGTCTATACCGACGTTAAGGAC
CTGGGTGTAGCTTTGGAGGGAAAGACTGTTTGGGTCAGAGTCCGCCTCCAGACCTCCCGT
GCTAAGGGGAAGCAGTGCTTCTGTGTGCTCAGGCAAGCCTGTCACACCGTACAGCTACTG
ATGAGTGTGAACGAGGAGCGCGCCATCAGCAAGAACATGGTCAAATTCACTGGCAATATA
ACCAAGGAGTCCATAGTGGATATCCAGGCTACCGTGGCCCGCACTGGAGCCCCGGTAGAT
TCCTGCTCTGTACGGGACGTGGAGCTGGTCGGGGTTCAGGTCTGGGTGGTTTCGCAGGCT
AGACCACAATTACCGCTGCAGATCGAAGATGCCGCCCGCCCTGAGAATAACGATCCCGAA
GGTCTCAAGATCCGCGTGAACCAGGACACGCGCCTGGACAACCGCGTGCTGGACCTGCGG
ACCCCCGCCAACCAGGCGATCTTTAGGATAGAGGCTGGCGTCTGTCGGCTGTTCAGAGAC
ATTCTCACTAAGCGAGCATTCAATGGATTCACCGTGCGGGTGCCGGGTCCATCGCCTTGC
AAAGAGAGGAACTTCAGCAGTGCCTGGAACTTGCGACCCAGTATAACCAAGGAGTCCATA
GTGGATATCCAGGCTACCGTGGCCCGCACTGGAGCCCCAGTAGATTCCTGCTCTGTACGG
GACGTGGAGCTGGTCGGGGTTCAGGTCTGGGTGGTTTCGCAGGCTAGACCACAATTACCG
CTGCAGATCGAAGATGCCGCCCGCCCTGAGAATAACGATCCCGAAGGTCTCAAGATCCGC
GTGAACCAGGACACGCGCCTGGACAACCGCGTGCTGGACCTGCGGACCCCCGCCAACCAG
GCGATCTTTAGGATAGAGGCTGGCGTCTGTCGGCTGTTCAGAGACATTCTCACTAAGCGA
GGTGATACGTGTTAG
Protein sequence:
MSYGTPTLYIKWQLSQKLIKMVASDDTKPTVEGDAGGSKKAAKKAAKAAEKQQKKAEHKA
SSVQNEVQDEKDISEGRYGIMKLIQSTGENRDRVYTDVKDLGVALEGKTVWVRVRLQTSR
AKGKQCFCVLRQACHTVQLLMSVNEERAISKNMVKFTGNITKESIVDIQATVARTGAPVD
SCSVRDVELVGVQVWVVSQARPQLPLQIEDAARPENNDPEGLKIRVNQDTRLDNRVLDLR
TPANQAIFRIEAGVCRLFRDILTKRAFNGFTVRVPGPSPCKERNFSSAWNLRPSITKESI
VDIQATVARTGAPVDSCSVRDVELVGVQVWVVSQARPQLPLQIEDAARPENNDPEGLKIR
VNQDTRLDNRVLDLRTPANQAIFRIEAGVCRLFRDILTKRGDTC