| New model in OGS2.0 | DPOGS211067 |
|---|---|
| Genomic Position | scaffold1559:- 4138-4906 |
| See gene structure | |
| CDS Length | 522 |
| Paired RNAseq reads | 57 |
| Single RNAseq reads | 176 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011938 (2e-36) |
| Best Drosophila hit | CG31922 (6e-13) |
| Best Human hit | zinc finger matrin-type protein 5 (8e-14) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Nasonia vitripennis] (2e-20) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Nasonia vitripennis] (3e-22) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0046872 metal ion binding GO:0006397 mRNA processing GO:0005634 nucleus GO:0008380 RNA splicing GO:0005681 spliceosomal complex |
| InterPro families | IPR000571 Zinc finger, CCCH-type IPR013085 Zinc finger, U1-C type |
| Orthology group | MCL12198 |
Nucleotide sequence:
ATGGGTAAAAAATATTATTGTGATTACTGTGAGAAGACCATGTCTTCAGCGCCATTGATC
ATCAAAACTCATAACAAGGGTATGGCTCATCAGAAGTTAGTTGGTGAACATTACAAGCAG
TTCAAAGATGCCAAGACAATTTTAGAAGAAGAAAACAATAAAAAACCATGTCTGAAATAT
CTAAAAGGGGAATGTCATTTTGGTACAATGTGTAGATTTTCTCATTACACAAGAGATGAA
TTATGTCTCCTAAAACAAATTGTCGATGCAAAAAATAATGTATCAGATTCGAACCAACCC
TCCTTCAAAGAGCTTTACGATAAACTACAAAGCGATAAATGTGAATATTTTGAAAATAAA
AATGCACTGGTAGACAAAAATGGTATAACGCATATGTTACCGTGGAATTATAATGTTATT
TTTGAACAGTATGGAGATAAATTACCGCCCAGTCTTAGAAAATTTAAAACCGATGATTTT
ATAAATGTATTTATAACCGAGTGGGGTGATAACAAATGTTAA
Protein sequence:
MGKKYYCDYCEKTMSSAPLIIKTHNKGMAHQKLVGEHYKQFKDAKTILEEENNKKPCLKY
LKGECHFGTMCRFSHYTRDELCLLKQIVDAKNNVSDSNQPSFKELYDKLQSDKCEYFENK
NALVDKNGITHMLPWNYNVIFEQYGDKLPPSLRKFKTDDFINVFITEWGDNKC