| New model in OGS2.0 | DPOGS211732 |
|---|---|
| Genomic Position | scaffold2171:+ 21748-33989 |
| See gene structure | |
| CDS Length | 2667 |
| Paired RNAseq reads | 93 |
| Single RNAseq reads | 218 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013978 (3e-96) |
| Best Drosophila hit | patj, isoform B (7e-31) |
| Best Human hit | multiple PDZ domain protein (3e-17) |
| Best NR hit (blastp) | PREDICTED: similar to GA11344-PA [Tribolium castaneum] (6e-57) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC009801 [Tribolium castaneum] (2e-51) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0007163 establishment or maintenance of cell polarity GO:0016333 morphogenesis of follicular epithelium GO:0005635 nuclear envelope GO:0016324 apical plasma membrane GO:0016334 establishment or maintenance of polarity of follicular epithelium GO:0045186 zonula adherens assembly GO:0045196 establishment or maintenance of neuroblast polarity GO:0045179 apical cortex GO:0005886 plasma membrane GO:0016332 establishment or maintenance of polarity of embryonic epithelium GO:0035003 subapical complex GO:0007043 cell-cell junction assembly GO:0005918 septate junction GO:0002009 morphogenesis of an epithelium GO:0045176 apical protein localization GO:0005515 protein binding GO:0001736 establishment of planar polarity GO:0045494 photoreceptor cell maintenance GO:0034332 adherens junction organization GO:0008594 photoreceptor cell morphogenesis GO:0005875 microtubule associated complex |
| InterPro families | IPR001478 PDZ/DHR/GLGF |
| Orthology group | ND |
Nucleotide sequence:
ATGTTATATATTAGAGAGACGATACTTCTCACCTTTCATGGATTCACCGTGCAGGTGCCG
CGTCCGTCGCTTTGCAGGGAGAAGACCTTATCAGTGCCTGGGACTTGTGACCAGGTTGAC
GGTGTCCCTTTGCATGGGGTCACAAATCACAGGGCTGTGGCCTTACTTAGGGATGCGAGG
GGTCCTATTGTTAAATTAAAAGCCTTGAGATATCTTCGTGGTGCGGGTTTCGAACGACTT
CAAAAGGCGCTGGCGGCTCAAGACGGCCGGCGCTCACCGATCGCACCCCCAAGCCCCTCA
GTGACATCTCTTGCCAAATATAGCTTTAGTGTGTACGACGAATCAACGGTGATTGAAGCG
GAGCCGGAGTCAGAGGTCCAAGGTCACCTTCCATCACCGACTTCCCCCGAGGATGCGGAG
ATCGTGATCGGCAGAGATGATGACATCTCAGAGAGAGAGGTCAGGAGAATACAGGACAAG
TGGCGGGATGTCCTGACTGAGGAACCTGATTGGCCAGGACATGACCAGCCATATGATATC
GTAGTAGGAACTATAATGAGAGAGCGGGATAGCGGCTTGGGGATTTCTTTAGAGGGCACG
GTGAGGGTAGTTGCGGGGAAGGAGGTCCAAGCTCGCCATTACATCAGAGCCATCGCACCA
AATGGACCAGTTGCTCGGATGGGTCTTTTTAGGGTAGGCGATGAATTGTTAGAGGTGAAT
GGTTGGCGTGTTTTGGGCGCTCACCACGTGGAAGTCGTCACCAGACTGAGGGCGGTTCGA
TCTCCAGCCGTTCTTGTGGCAGCAAGACGATTGCCTAAAACTCCGACGGTGCTGGGTGGA
AGTCTCCAGGAACTACTAGCTCCTCCTCAGCGTCTCATTAAAGCCAAGTCTGAGAGTTCA
GTGTCTTCACTGTGCAGCGCCAGCACGGTTCTATCCGGACATCATCACGACGAATTCTGC
TCCGACCTTGAGCGTAATAGGTCAAGGTCGCTGGAGCCGCTCAGTGGGCTCGCCATGTGG
AGCGATCAGGTTGAATACATACAACTAATGAAGGAAGACAGAGGACTTGGCTTCTCGATC
TTGGATTATCTGGAAGACGTGAATAAAAGAACGAATGCGTTAGGCATAGTGACCATTGGT
ATATCGAAACCTCTTCCTTGTAGCACCATCGTGGGTGGCGAACGAGCCAACGGACAGAGC
GATCAGGGCAGTCAGGAATGCATTAATTCGTTAGCATCCGACGATCATACTGGGATGGAT
TCCTTCCACGAATGCTTACAGGAATACGGTGAAGGTTTGGAAGTTGTGCAAATATGTCTG
GAACCAGAAGATGAATCTGCTAAATACGAGGACTTGTCCGCTTTGGCTGACGTGAGTTAC
GATGATTGTAAGAAAGACACTATCAGAGACGATGACTTTATAACGGAAGTCAAAGATAAC
AAACAAGTTAACGGCGTTATGGAATTTAAATCGTCCAAATCTGATGGATCCTTGGACGAT
CCAGATGATGACATGACCATAACCGAGGATGACACTTTACACACGCCGCGTGAGCTGACT
ATGAGAAGTAAATCAGAAGACAGGAAAGATAAAGATCGGGGGAGAGGTTTGTCAAAACAG
CAGAGCAAAGACTTATCAACGTCGGACGAGATGGTGTTCGCAGTTACACCGACAGGTCTA
GAAAGAATCAGCTTTGAAAAATACTGGAAGGACGTTGATGTGAGCAAAAGCAAAACACAG
AACGACGATAGTTGGAAAGAATGTCCCAATTCCCCATCCGACGATACGAGCTTCTACGAT
GCGACCATGAGAATATCTGTACAGGAACAAAACAATTCCCTACTGTACATTGACCATGAG
ATCGATGGGTATGAGACATGCGTAGATGATGACTCTTCGTCTGTTAAGTGTCCAGACAAC
AGCAGCTATAAAATTAACGGAGAGAGCGAGATCAAAGAATTAGATAAACACGATAAAATA
CACTTTAATAACAAAGACAACGATGTTTGTGCCAAAACTGAAGACGATCAGATCACTGCC
AATGCCGTAGACGATGTGTCGTCTTACAGCCATCCGTATATAGAAGAACATATTATTAAA
CAGATGAAATCGTTAAGAATAGAGCCTTTAAGTATACACATAAATAATAAAAAAATAAAG
AAGAAAAGTCCATCGAAACCGTCCAAGAGTGAGCGTCGCGTTATCGAATATTACAACGAC
CAAGCTGAATGCTTAAAAGAGATAAGACAAAAGAAACTAGAAGAAGAAGAAAAGAAGTAC
AGGGAAGAGCATCAGATAAGTGAATGTTATAAAATAGCTGAGAAGAAAATGCATTTGAAA
AAACAACTGCCAAGCGAAGAATCGACAGACGTTGAACCTTATGTGTCCGGATGTCATAAA
TGTTTTTTAGAGAACTACGCTTACGAAATAACGAAGGCTTATATAAAAGAAGCGAGCACT
TGTAAATATTGTGAGGTGATTCGTGATATGTTAGAAGGGCCTAAGGTTATGCCGAACAGA
AGGATGTCTGCTCCAGCACTGTTCAATCTGGAGAGTATAGATACAGACACTGATGATGAA
GATCTTCTGGCTGTTCCTGTAGTCAAAGATAGGAGGAAGTCCACCGGTCCATTAAAGTTT
CCAGTAGCTGGCAGAAGATCGAGGTAA
Protein sequence:
MLYIRETILLTFHGFTVQVPRPSLCREKTLSVPGTCDQVDGVPLHGVTNHRAVALLRDAR
GPIVKLKALRYLRGAGFERLQKALAAQDGRRSPIAPPSPSVTSLAKYSFSVYDESTVIEA
EPESEVQGHLPSPTSPEDAEIVIGRDDDISEREVRRIQDKWRDVLTEEPDWPGHDQPYDI
VVGTIMRERDSGLGISLEGTVRVVAGKEVQARHYIRAIAPNGPVARMGLFRVGDELLEVN
GWRVLGAHHVEVVTRLRAVRSPAVLVAARRLPKTPTVLGGSLQELLAPPQRLIKAKSESS
VSSLCSASTVLSGHHHDEFCSDLERNRSRSLEPLSGLAMWSDQVEYIQLMKEDRGLGFSI
LDYLEDVNKRTNALGIVTIGISKPLPCSTIVGGERANGQSDQGSQECINSLASDDHTGMD
SFHECLQEYGEGLEVVQICLEPEDESAKYEDLSALADVSYDDCKKDTIRDDDFITEVKDN
KQVNGVMEFKSSKSDGSLDDPDDDMTITEDDTLHTPRELTMRSKSEDRKDKDRGRGLSKQ
QSKDLSTSDEMVFAVTPTGLERISFEKYWKDVDVSKSKTQNDDSWKECPNSPSDDTSFYD
ATMRISVQEQNNSLLYIDHEIDGYETCVDDDSSSVKCPDNSSYKINGESEIKELDKHDKI
HFNNKDNDVCAKTEDDQITANAVDDVSSYSHPYIEEHIIKQMKSLRIEPLSIHINNKKIK
KKSPSKPSKSERRVIEYYNDQAECLKEIRQKKLEEEEKKYREEHQISECYKIAEKKMHLK
KQLPSEESTDVEPYVSGCHKCFLENYAYEITKAYIKEASTCKYCEVIRDMLEGPKVMPNR
RMSAPALFNLESIDTDTDDEDLLAVPVVKDRRKSTGPLKFPVAGRRSR