| New model in OGS2.0 | DPOGS210630 |
|---|---|
| Genomic Position | scaffold600:- 39811-42586 |
| See gene structure | |
| CDS Length | 2181 |
| Paired RNAseq reads | 889 |
| Single RNAseq reads | 2420 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013636 (2e-23) |
| Best Drosophila hit | crooked legs, isoform A (1e-32) |
| Best Human hit | putative uncharacterized zinc finger protein 814 (2e-39) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC000840 [Tribolium castaneum] (1e-45) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_61400 [Branchiostoma floridae] (3e-54) |
| GeneOntology terms | GO:0005622 intracellular GO:0006355 regulation of transcription, DNA-dependent GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0046872 metal ion binding |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL39212 |
Nucleotide sequence:
ATGGCTTCGCACACACAACCCAATAGACCCAGCTCCATCATGAGCCCAAAACCTACTACA
ATCGATTTAGTCGGCGGAATCTACTGTAACATATGTAATTTGATATATGCAAATAAGAAG
GATTACGACCTACATTACACTAAACACGAAACTGGCAGCAAGGACATAGTTTACACTTGC
GTAGTGTGTAGAAAAGAAATCTCAGGCTATCCAAGCTTTCGTGGTCATTGTTACACAAGT
CATGTCATCAAAGAGAGATTTAAATGTGAACACTGTTCAAAATTATTTTCAAAGTTTGCT
TCACTACGAGAACATGTCATGGTAATGCATAGATTCAGATGCAACACTTGCAAGAAGGAA
TTTACATCAAAAAAAGAATTGAAATTGCATGAAATTATTCACAATGACAACGACAGTCCT
CCTTATGAATGTAAAGCGTGCGGTGAGGAGTTAGACACTCTGGAAGACTGCAAGAATCAT
ATAGACGTACACTCAGCATTCATATACTTTTGCCCCATATGTAATGAAAATATATCAAAT
AAAGAAAACTCCAGTGAGCATTTGAAGAAACATTTTGGACATGTGATTAATACAAATACT
ATTGAAACACAAAAGAGTCTGGACAAAGAGGAAAATTCAGTTGAGAGATTGGGCGGGATT
TCGTGTAGTTATTGCTCCCAGACTTACAAGAACCGTATGGAATTTGATGCCCACTTCTCA
TGCGACCACGGAGACAAAGATATCATATACAGCTGTATTGTGTGTGCAAAGCAGTTTGAG
AAGTATTCCGTATTTAGTCATCATGCTTACAATCACTTCACCAAAGGAAGATTTTGTTGT
GACATATGCCGGAAGACATTCAACCGTCTCTCCCTGCTGGTGACTCACACGGCCGCCTGT
CAGACCGATGCCGAATGTAAGGGGAAGCCGTTCACTTGCTATCAGTGTGGACACCGCTAT
GTGACGGAGATGAGGCTGAGGGAACATCTGAGGGATATACACGGTGTACACTGTGTCATC
TGTCCGGAGGAAGGCTGTCAGGAAGTATTTGCCACACCAAAAGAATTGGTATTCCACCAA
CGTGCGCACCAATCCGACCGGAACTGGTGTCGCCAGTGTGGCCTGTTGTTCACCGGCCTC
GCCTCCTGCGAGCGACATCTCGACGTCCACAAGAAGAAGCTGTATGTGTGTCCGGTCTGC
AACAAGAACTACAGCGAGAAGCATCTCATACTGAAACATATCTCACAACATTTTGAAACT
GTTTTGCACATTTGCAAAGTGTGCGGGAAGGTCTACAACGCCAAGAATCGTCTGATCGAA
CACTTCAAGTCGCACTCCGAGAACAAAACCCACAGTTGCACCTACTGCGACAAGAGTTTC
GTGAAAATTGGCCAACTGCAGCAACATCTGAACATACACACGGGCTCCAAGCCATACAAG
TGTCCGGTCTGCTCGAAAACGTTCGCCAGCTATCCCAACTGGCATAAACACTTGCGTCGA
ATGCACAACGGCGACGGAAAAAATTACAAGAAACCAGATATCGACAACGAAGAAGAGAAC
ATCCACGATGAGAACGTGGAAGAATATCCTGGCGCCGATAGAAGTGTACAGAAGACAGAC
GCGTCTCGAGAAGACAAGCACACGCACCTCAAGGTAGACGCGGAACCGGCTGGTAATAAG
GAATCCAGACTGGACACATACATCTATTACGAACCGAACGACAGCACCATGGAGTCGGAC
AGCATCGATCACGCCGTCATCGAGAAGGAGTTGGAAATATTCGAGAACACAAACGACGAG
AGTATCGGCAACATCACGAAGTTTGTCAACGTCTTGGCCACGAACAATACGGTGTGCGTT
GGCGAGAGTTCCGAGTCGTCGGCAGCCAGCGCCTTCCCCGCCGAGTACGGGCCAGAGTTC
AGCGGGGTCATCGACCTGGACGACCACATGTTGCCTCACATCGATCCGCTGCTCATCAAC
AGCCAGCCGCCCCCGCCCTACGACCAGTTGGCCGACTCGTTGGTCGACTCACTGGCCGAC
TACACCGACAACTTCGCCGAAGCCTACGCCCCACCCAAATGGGAACCCATCATCACCAAG
GTGTACCAGGACTACTCCTACGGTTACGGAGAAATGGTCGAGTCCAACCGACTGTCCATA
ATGAACACAGATATATTTTGA
Protein sequence:
MASHTQPNRPSSIMSPKPTTIDLVGGIYCNICNLIYANKKDYDLHYTKHETGSKDIVYTC
VVCRKEISGYPSFRGHCYTSHVIKERFKCEHCSKLFSKFASLREHVMVMHRFRCNTCKKE
FTSKKELKLHEIIHNDNDSPPYECKACGEELDTLEDCKNHIDVHSAFIYFCPICNENISN
KENSSEHLKKHFGHVINTNTIETQKSLDKEENSVERLGGISCSYCSQTYKNRMEFDAHFS
CDHGDKDIIYSCIVCAKQFEKYSVFSHHAYNHFTKGRFCCDICRKTFNRLSLLVTHTAAC
QTDAECKGKPFTCYQCGHRYVTEMRLREHLRDIHGVHCVICPEEGCQEVFATPKELVFHQ
RAHQSDRNWCRQCGLLFTGLASCERHLDVHKKKLYVCPVCNKNYSEKHLILKHISQHFET
VLHICKVCGKVYNAKNRLIEHFKSHSENKTHSCTYCDKSFVKIGQLQQHLNIHTGSKPYK
CPVCSKTFASYPNWHKHLRRMHNGDGKNYKKPDIDNEEENIHDENVEEYPGADRSVQKTD
ASREDKHTHLKVDAEPAGNKESRLDTYIYYEPNDSTMESDSIDHAVIEKELEIFENTNDE
SIGNITKFVNVLATNNTVCVGESSESSAASAFPAEYGPEFSGVIDLDDHMLPHIDPLLIN
SQPPPPYDQLADSLVDSLADYTDNFAEAYAPPKWEPIITKVYQDYSYGYGEMVESNRLSI
MNTDIF