| New model in OGS2.0 | DPOGS215556 |
|---|---|
| Genomic Position | scaffold860:+ 5273-7201 |
| See gene structure | |
| CDS Length | 1929 |
| Paired RNAseq reads | 182 |
| Single RNAseq reads | 494 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010685 (7e-142) |
| Best Drosophila hit | PSEA-binding protein 95kD (5e-19) |
| Best Human hit | snRNA-activating protein complex subunit 4 (7e-27) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC004408 [Tribolium castaneum] (9e-40) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC004408 [Tribolium castaneum] (3e-40) |
| GeneOntology terms | GO:0005634 nucleus GO:0006350 transcription GO:0045449 regulation of transcription GO:0003677 DNA binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR012287 Homeodomain-related IPR017877 MYB-like IPR017930 Transcription regulator HTH, Myb-type, DNA-binding IPR014778 Myb, DNA-binding IPR001005 SANT domain, DNA binding IPR009057 Homeodomain-like IPR015495 Myb transcription factor |
| Orthology group | MCL12085 |
Nucleotide sequence:
ATGAAAAACGTAGACAAAGATCTATCTGATAGACAGGACAGACAAGAGGCGTTCCGTTAT
GTTAATTGCGGTAAACCATACTTCAAAGATAGATGCTTCTTCCCAGCTCCTGATAATGAG
GATACATTATTAATGGTTAAGTCTGGAATGTATGATTTTTCAAATATAGCTTCCATTGCT
GGTTGGACTGTTAAAGACAAAAGTCAATTTTTAATTGTATTGCAAAAACTGTCACAGACA
CTTAAAAAGAATGAGATAAAATCAAAAATAGCAGAGTTAAAACGCGAAAGTAAAGTTAAT
GAAACGAAGAAAAATTGCAGAATGATTGTCGCTTTGAACAGGGAAATGGATAGAATCAAT
AAAATGGCATTAAAGGATGTAGCTTTACCCATTGACCAAGAATATGATTGGGATTTTGTC
GCCAATAAATTGAATTTCAGACACAGTGCACAGGAATATCGATCACTTTGGAAATTGTTC
CTCCATCCAAGTATCAATAAGAGTTCATGGAATAAGACTGAACACACATTACTACAAAGA
ATAGTACTAGAAGAGAATCTTGTAAATTGGGACACAATAGCATTAAAATTAGGCACTAGA
CGCACTAGTTATCAGTGCTTTGTTTATTTCAGGACAAACATGAGCAATACATTCACAGGT
ATGAAATGGACTAAGGAGGAAGAGGAATATCTTAAAAGGTTAATTGATTACTACAAACAA
GATAACTACATCCCTTGGGGTAAAGTTGCAGCATCTATGGAGAATAGGACCAAGATTCAA
ATTTATAACAAATTTTTACGATTGGAGGAACACAGAAAAGGCAGGTTTATGCCCGAGGAA
GATGCTGTAATATTGACAGGTGTTGATAGTTTTGGGCAAGACTATAAGAAAATTTCAAAA
TACCTTCCGGGTAGATCCGCAGCCCAGTGCAGAGTTAGGTATCAAGTGTTAGCTAAGAAG
CGAATTTCAGCTGTTTGGACAGTGGACGAGGATAGAAAACTAGTGCAATTAATGGCAAAT
CAAGATTCAAACATTAATTATTCCACTTTGGTTCCTTATTTTCAAGGAAAAGATAGGTTT
CATTTGAGATCCCGATATTTGACCTTGACAAAGTGGATGAGACTGCATCCCAATATGGAT
ATAGCTTTAGCACCCAGACGAGGGGCTCGACGCTTAGGTCACGGCCAATCATCTGATGAC
CTGAATTCAGCCATTGAAAGTTTAAAAACGAAGATTCAATCAGAACTCACAGACAATAGG
AAGAAAAGGGTAACTAAAGATTCTCCTGAAAATGTTATTGAAGATGCAATTATTGCTACG
CTTGTTACGGAAAATGTCAGGTTGGAAGAAGCTAGGAAAGGTCAGACATCTTGCGATACG
CAGACTGGTATGGAACAAAGAAATAAAACGAGCAACGCCTGCAATCTATCAAGTTTGCAG
AAAGTTTTAATTCTATTACGATCAAAGTTAAATAAAAAGAAATTTATTCAAAATGGCGAT
CCGAAGTATAAAGGTTTGATTGAGACAGAAAATGATATTTATTCCGTAAGAGTTAAATCC
TATTCTAAGGAGAATATAAAAAAGAATAATGTTAACATTAATTCTAAACCCGATATTTGG
GGTGAAGTTTGTCTTGGTCCTTTGGAACACGTGTTTCCACCGCATTACGCGACGATAACT
GGTTGCAGGAAACTAATGTCCTATGTAAGCAGCAAACCCAATAGGGATGACACTGTTAAC
CTACAAACGTTACTAAGAAAAAACATCCTTCTCAAAGAACAACTGCTTCTTTTGATGGAA
CGATTTAATGCTTTATTTCTTTGGCCCCTTCTTCTATCCAACTCACCTCCAGAGCCTTTC
GCATCAATAGAAAATGATAAGTCATTAATTGATAAAGACATTAAAATCTTTAAGGATGAT
GAAAATTAG
Protein sequence:
MKNVDKDLSDRQDRQEAFRYVNCGKPYFKDRCFFPAPDNEDTLLMVKSGMYDFSNIASIA
GWTVKDKSQFLIVLQKLSQTLKKNEIKSKIAELKRESKVNETKKNCRMIVALNREMDRIN
KMALKDVALPIDQEYDWDFVANKLNFRHSAQEYRSLWKLFLHPSINKSSWNKTEHTLLQR
IVLEENLVNWDTIALKLGTRRTSYQCFVYFRTNMSNTFTGMKWTKEEEEYLKRLIDYYKQ
DNYIPWGKVAASMENRTKIQIYNKFLRLEEHRKGRFMPEEDAVILTGVDSFGQDYKKISK
YLPGRSAAQCRVRYQVLAKKRISAVWTVDEDRKLVQLMANQDSNINYSTLVPYFQGKDRF
HLRSRYLTLTKWMRLHPNMDIALAPRRGARRLGHGQSSDDLNSAIESLKTKIQSELTDNR
KKRVTKDSPENVIEDAIIATLVTENVRLEEARKGQTSCDTQTGMEQRNKTSNACNLSSLQ
KVLILLRSKLNKKKFIQNGDPKYKGLIETENDIYSVRVKSYSKENIKKNNVNINSKPDIW
GEVCLGPLEHVFPPHYATITGCRKLMSYVSSKPNRDDTVNLQTLLRKNILLKEQLLLLME
RFNALFLWPLLLSNSPPEPFASIENDKSLIDKDIKIFKDDEN