New model in OGS2.0 | DPOGS209418  |
---|---|
Genomic Position | scaffold5103:+ 2278-6908 |
See gene structure | |
CDS Length | 825 |
Paired RNAseq reads   | 2417 |
Single RNAseq reads   | 5871 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012605 (3e-07) |
Best Drosophila hit   | cuticular protein 67Fb (3e-17) |
Best Human hit | ND |
Best NR hit (blastp)   | cuticular protein RR-1 motif 15 [Bombyx mori] (8e-52) |
Best NR hit (blastx)   | cuticular protein RR-1 motif 15 [Bombyx mori] (4e-48) |
GeneOntology terms   | GO:0005214 structural constituent of chitin-based cuticle |
InterPro families   | IPR000618 Insect cuticle protein |
Orthology group | MCL20365 |
Nucleotide sequence:
ATGAAACTGTTTGTGGTTGCCGCTATGCTCGGAGTCTGCTCAGCAGCCCGCCTTGACAAC
GCATACCTCCCTCCCAGAGGTGGAGATGGCGCAGGCTATGGTGCTACGGGTTCTGGTTTT
GGATCCAGCTTTGGTAGAGGGGCTGTAGCAGGCTTTGGACCTAGCGGCGCTGGTTTCGGG
GGAAATGCTGGAGGACAAAGCTACAGCGGAGCCGGTGTTGGAGGCGGTTCAGGTTTTGGA
CAAGGAGCCGGTCAAGGCTACCAAGGTTTTGTAGGAAAGAGCAACCCCGCCGACGCTAAC
GCCCAAATTCTGAAATACAACAACGAAGTTACTGCTGAAGGATTCTCATACGATTTCGAA
ACATCCAACGGTATTAGGGCTGATGCTTCCGGGGTGGCCACTAATGGTGTCCAATCTCAG
GGTAGCTTCTCGTACAAGGGTGACGATGGCCAAGACTACTCCATCACATACACTGCTGAT
GAGAACGGTTACCAACCACGTGGAGCTCATCTGCCCACTCCTCCTCCCATCCCTGAGGCG
ATCCTGAAATCCCTGGAGCAAAACGCTCGTGACGAAGCAGCTGGCATCGTTGACGATGGC
TCTTACCGCGGCGAGGGTGCTGGAAGCGCGGCGGGTTACTCCGGCCAGGGTGCCTACTCT
GGCAACCGTGGTTACAACTCTCAGGCTGGTAACTTCGGTGGTTCATCAGGTTTCGGTGGA
TCTTCAAACATCGGCGCTGCGTCCCGCCAATACCTCGCTCCCAACGTTGGCGCCCGAGGC
TCTGGCAACGGAAACTACAACTCCCAAACAGGATACCGTTACTAA
Protein sequence:
MKLFVVAAMLGVCSAARLDNAYLPPRGGDGAGYGATGSGFGSSFGRGAVAGFGPSGAGFG
GNAGGQSYSGAGVGGGSGFGQGAGQGYQGFVGKSNPADANAQILKYNNEVTAEGFSYDFE
TSNGIRADASGVATNGVQSQGSFSYKGDDGQDYSITYTADENGYQPRGAHLPTPPPIPEA
ILKSLEQNARDEAAGIVDDGSYRGEGAGSAAGYSGQGAYSGNRGYNSQAGNFGGSSGFGG
SSNIGAASRQYLAPNVGARGSGNGNYNSQTGYRY