| New model in OGS2.0 | DPOGS208166 |
|---|---|
| Genomic Position | scaffold1211:- 15543-37582 |
| See gene structure | |
| CDS Length | 1914 |
| Paired RNAseq reads | 3756 |
| Single RNAseq reads | 9399 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004608 (0.0) |
| Best Drosophila hit | fimbrin, isoform A (0.0) |
| Best Human hit | plastin-3 isoform 1 (7e-164) |
| Best NR hit (blastp) | PREDICTED: similar to Fimbrin CG8649-PA, isoform A [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Fimbrin CG8649-PA, isoform A [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0003779 actin binding GO:0016321 female meiosis chromosome segregation GO:0005509 calcium ion binding |
| InterPro families | IPR018247 EF-Hand 1, calcium-binding site IPR001589 Actinin-type, actin-binding, conserved site IPR011992 EF-hand-like domain IPR001715 Calponin homology domain IPR018249 EF-HAND 2 IPR002048 Calcium-binding EF-hand |
| Orthology group | MCL10951 |
Nucleotide sequence:
ATGGCAGACAATTCAAAATTGACCGATGAGGAGTTATCTGAAATCAGGGAACAATTTGCT
CAGCTGGACACGAGCGGTAACGGGTACATTGATTTGAAGGAGCTAAAAGATGCATTGGAC
AGCGTCGGATATAAAATACCACAATGGAAGGTTCGATGTATGATAGAGGAATATTACGAC
AGCGGCGCCAAGAGCGGTCGGGGCGTTAATGGTAGCATGAACGGAGACGCCAAGAAGAAT
GGCATTTCACTGGCTGAGTTTGAGGAACTTTGCGCCAATCTCAAAGCACAGCAGGTGTCG
AGTACATTTAAACAGGCTGTCAGTAAAAAGGAAAATCTTGAACACTTGGGCGGAATGAGT
GAGGCTTCTAGTGATGGTACAACTCACTCCGTCCGTCTTGAGGAACAGATGGCGTTCTCT
GGATGGATCAACAGTAACCTGGAGCACGACCCCGACCTCAAACATCTGCTGCCCATCGAC
CCCGAGGGCAAACGGCTGTATGAGAAGCTCAAGGATGGACTTATACTTTGTAAAGTAATA
AACCACTCATGCCCTGACACTATTGATGAGAGAGCCATCAACAAGAAGAATCTGACGCTT
TACACCAAACATGAAAACCTCACACTGGCGCTGGTCTCCTCACAGGCCATTGGATGTAAC
ATAGTCAACATAGATGCCCACGATCTGGCCAAAGGAAAACCTCATCTCGTGCTGGGTCTG
TTGTGGCAGATCATTCGTATCGGTCTCTTCAACCAGATCACTCTGGAACATTGTCCAGGC
CTCACAGAACTGCTCAATGACCAGGAGCGGATCGAAGACCTGCTAGCTCTGTCTCCGGAA
GCGATCCTCCTCCGCTGGGTGAACCACCAGCTGCAGGCTGCAGGTGTAACTCGCAGGTGT
ACCAACTTCCAGCAGGACGTGGCGGACTCCGAGGTGTACAGCTACCTCCTCAAACAGATC
GCTCCAGATGATGCAGGTGTAACACTCGACGCGCTGAGGGAAACGGACCTGCTCCGTCGA
GCGGAAGTGATGTTACAGCAGGCGGCTAAGCTGAGATGCCGCGCCTTCGTGACGCCGGCG
GATGTGGTGGGAGGGGTGTACAAGCTGAACCTGGCCTTCGTCGCCAACCTGTTCAACCAA
CATCCGGGACTGCAGAGGAACGACAACAACGAGGCCTACCATCCCCTGGACGAGACCAGG
GAGGAAAAAACGTATCGTAACTGGATGAACTCCATGGGTGTCGCTCCTCACGTCAACTGG
CTGTACTCCGACCTCACGGACGGGCTCGTCATATTCCAGCTCTACGACATCATCAAGCCG
GGGATCGTTAACTGGAAGAAGGTCCATCGTCAGTTTTCTAAGCTTACTCGTTTTATGGAG
CGTCTAGAGAACTGTAACTACGTTGTGGAGTTAGGCAAAGCGTTGGGCTTTTCACTAGTG
GGTATAGCGGGCGCCGACATCAACGAGGGAAACGCCACACTCACTCTTGCTCTCATATGG
CAGTTGATGCGCGCCTACACGCTGTCGGTGTTGACTCGCCTCGCCAACACCGGCAACCCG
ATCATAGAGAAGGAGATAGTTCAGTGGGTCAATAACAAGCTGCAGGCCGCTGGGAAGACC
TCCTCCATCAAGACCTTCCAGGACGAGGCTCTGGCTGACGCTAAGATAGTTCTGGATTTG
ATAGACGCCATTAAACCCGGAACCATCAACTATGACCTGGTGTTACACGGCGGCACCGTG
GAGGATAACCTCGCCAACGCCAAGTACGCTATATCCATGGCGAGGCGCTGTGGCGCGCGA
GTGTACGCGCTGCCCGAGGACATCACCGAGAGGAAGCCGAAGATGATCATGACGGTGTTC
GCCTGCCTCATGGCGCTCGACTACATCCCCGCCATGGACGCGCCCGCCATGTAA
Protein sequence:
MADNSKLTDEELSEIREQFAQLDTSGNGYIDLKELKDALDSVGYKIPQWKVRCMIEEYYD
SGAKSGRGVNGSMNGDAKKNGISLAEFEELCANLKAQQVSSTFKQAVSKKENLEHLGGMS
EASSDGTTHSVRLEEQMAFSGWINSNLEHDPDLKHLLPIDPEGKRLYEKLKDGLILCKVI
NHSCPDTIDERAINKKNLTLYTKHENLTLALVSSQAIGCNIVNIDAHDLAKGKPHLVLGL
LWQIIRIGLFNQITLEHCPGLTELLNDQERIEDLLALSPEAILLRWVNHQLQAAGVTRRC
TNFQQDVADSEVYSYLLKQIAPDDAGVTLDALRETDLLRRAEVMLQQAAKLRCRAFVTPA
DVVGGVYKLNLAFVANLFNQHPGLQRNDNNEAYHPLDETREEKTYRNWMNSMGVAPHVNW
LYSDLTDGLVIFQLYDIIKPGIVNWKKVHRQFSKLTRFMERLENCNYVVELGKALGFSLV
GIAGADINEGNATLTLALIWQLMRAYTLSVLTRLANTGNPIIEKEIVQWVNNKLQAAGKT
SSIKTFQDEALADAKIVLDLIDAIKPGTINYDLVLHGGTVEDNLANAKYAISMARRCGAR
VYALPEDITERKPKMIMTVFACLMALDYIPAMDAPAM