New model in OGS2.0 | DPOGS211188  |
---|---|
Genomic Position | scaffold52:- 7252-8639 |
See gene structure | |
CDS Length | 831 |
Paired RNAseq reads   | 173 |
Single RNAseq reads   | 482 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003176 (8e-96) |
Best Drosophila hit   | CG11617 (2e-45) |
Best Human hit | homeobox protein Mohawk (4e-15) |
Best NR hit (blastp)   | PREDICTED: similar to CG11617 CG11617-PA [Tribolium castaneum] (7e-57) |
Best NR hit (blastx)   | PREDICTED: similar to CG11617 CG11617-PA [Tribolium castaneum] (4e-61) |
GeneOntology terms    | GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0043565 sequence-specific DNA binding |
InterPro families    | IPR012287 Homeodomain-related IPR001356 Homeobox IPR009057 Homeodomain-like |
Orthology group | MCL18439 |
Nucleotide sequence:
ATGACAGTTATTCAAAGGACTAGTGCGGCAAAAGTGGAAAAAATGGATGGTACTTCGAAA
GAAGATAGTGCAAAATCAGCAAGACCAGTCAGGAATAGGAGATACACACGGAGATGCTTA
GTGGCCGGCCAGCGTCCTCAGAAGAGGCTGTTCACTCCAGAAATAAAACGCTATCTCAAA
GACTGGCTCGTCCGAAGAAGAGACAATCCTTATCCGAACCGCGAAGAAAAAAAACAATTA
TCGAGAGAGACGGGATTAACGTACATACAAATCTGCAACTGGTTTGCTAACTGGAGAAGA
AAATTAAAGAACGTGAATGCTGATCGCAATCAACTCACGTGGGGTCATTTAATACGTACA
TACAACGACCGCGCCCAGGGCAACGTGGAGCAATTCAGCATCTGCTCAGACGACAGCATA
TGGAGCGAACCAGAACAATCCAGTCCGAACAACGAACAAGACTACGACGCGAGGTTCGAA
AACAGCCCGGACTCGAATACTTCGTATAAACAAGACACAGAAGAAACATCACCACCCTGC
GAGAAATACGAAAGCTTCAACAATAATTCCAACGAGATAGAGAGATGCGATGATAATAAT
TGCGATAAGGTCATCACTAGTCCAGTACTTCTAAGCAAATGGCTGGAAAGCGCAGCTCGG
TTCCAACCAAGCGAAACTAATTATTCTTGGTGGGCGGATGGGAGAAGACGAAAACAAGAA
CAAAAGGTCCAAAGAATAGTTATAAACACAATAAAACATGATAGGGATGAGGTCGAAGCA
GCGATGGCACTTACAACGTTGGCATCAGCTAATTGTCTTACCGCTCCGTAA
Protein sequence:
MTVIQRTSAAKVEKMDGTSKEDSAKSARPVRNRRYTRRCLVAGQRPQKRLFTPEIKRYLK
DWLVRRRDNPYPNREEKKQLSRETGLTYIQICNWFANWRRKLKNVNADRNQLTWGHLIRT
YNDRAQGNVEQFSICSDDSIWSEPEQSSPNNEQDYDARFENSPDSNTSYKQDTEETSPPC
EKYESFNNNSNEIERCDDNNCDKVITSPVLLSKWLESAARFQPSETNYSWWADGRRRKQE
QKVQRIVINTIKHDRDEVEAAMALTTLASANCLTAP