| New model in OGS2.0 | DPOGS211117 |
|---|---|
| Genomic Position | scaffold52:+ 81620-84800 |
| See gene structure | |
| CDS Length | 576 |
| Paired RNAseq reads | 114 |
| Single RNAseq reads | 275 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002993 (1e-39) |
| Best Drosophila hit | midline (9e-11) |
| Best Human hit | T-box transcription factor TBX20 isoform 1 (5e-10) |
| Best NR hit (blastp) | PREDICTED: similar to T-box transcription factor TBX20 [Tribolium castaneum] (6e-34) |
| Best NR hit (blastx) | PREDICTED: similar to T-box transcription factor TBX20 [Tribolium castaneum] (7e-18) |
| GeneOntology terms | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0007507 heart development GO:0042684 cardioblast cell fate commitment GO:0035050 embryonic heart tube development GO:0016563 transcription activator activity GO:0042659 regulation of cell fate specification GO:0035223 leg disc pattern formation |
| InterPro families | IPR001699 Transcription factor, T-box IPR008967 p53-like transcription factor, DNA-binding |
| Orthology group | MCL39713 |
Nucleotide sequence:
ATGGGATGCGAAGTCGGTGAGGTGTGGTGCAGGTACTCGGAGGCCGTGAGCTTGATGCTG
CTGCAGGGCCGGGAAGGCTTCGAAGGCCGGGGGCCTGCCATGGAGGATGAGTGCTCGGCG
AGGCCCTGCGCCACTGACTTCTCCATCGCCGCCATAATGGCCAGGGACCGGCAGGAGCGG
AGGGAGCGCCGAAGACACAGAGACCCCAGAGAAGATACACTTACACCATTAGAAAAGTTT
GTGGACGCTACTGCATCCGCTGCGGAGTCTCCGTCTCCACCTCTGGAATATGAACGGGAT
TCCCCCGTGGACGTCTCCTCAACCTCAGAGGCTGGTTCAGCTGGAGCGCCCAGCGGTTCC
AGAGCTCTCTCCCCCCCAAGAAACCCTCAGCTGGCTGAACGATGGTCCAGCGAGGAAATG
AGGCACATACAGTGCCATCTCGAAACTAAAGAACTGTGGGACAAATTCAACGAACTAGGA
ACGGAAATGATCATCACAAAAACAGGAAGTCGATCATGGGGATACGGAGTCGTCAATGGC
GATAAGGCGGGTGGCACTCGGCGGCGCGAGGCGTAG
Protein sequence:
MGCEVGEVWCRYSEAVSLMLLQGREGFEGRGPAMEDECSARPCATDFSIAAIMARDRQER
RERRRHRDPREDTLTPLEKFVDATASAAESPSPPLEYERDSPVDVSSTSEAGSAGAPSGS
RALSPPRNPQLAERWSSEEMRHIQCHLETKELWDKFNELGTEMIITKTGSRSWGYGVVNG
DKAGGTRRREA