| New model in OGS2.0 | DPOGS211117 |
|---|---|
| Genomic Position | scaffold52:+ 96793-105619 |
| See gene structure | |
| CDS Length | 1014 |
| Paired RNAseq reads | 46 |
| Single RNAseq reads | 171 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002994 (2e-79) |
| Best Drosophila hit | midline (2e-70) |
| Best Human hit | T-box transcription factor TBX20 isoform 1 (4e-74) |
| Best NR hit (blastp) | T-box protein H15, putative [Pediculus humanus corporis] (3e-112) |
| Best NR hit (blastx) | T-box protein H15, putative [Pediculus humanus corporis] (5e-106) |
| GeneOntology terms | GO:0008283 cell proliferation GO:0045892 negative regulation of transcription, DNA-dependent GO:0005634 nucleus GO:0001569 patterning of blood vessels GO:0016563 transcription activator activity GO:0001947 heart looping GO:0005515 protein binding GO:0008015 blood circulation GO:0009953 dorsal/ventral pattern formation GO:0006936 muscle contraction GO:0045893 positive regulation of transcription, DNA-dependent GO:0035050 embryonic heart tube development GO:0003700 sequence-specific DNA binding transcription factor activity |
| InterPro families | IPR001699 Transcription factor, T-box IPR008967 p53-like transcription factor, DNA-binding |
| Orthology group | MCL10400 |
Nucleotide sequence:
ATGTTCCCGACGGTGCGAGTGTCTTTCGCGGGATGCCGAGCCGAGGCTCGTTACGCCGTA
TTGCTGGACGTGGTGCCGGTGGACGGCAAGCGTTACCGATACGCTTACCACCGCTCTTCC
TGGCTGGTGGCCGGCAAGGCAGACCCTCCCGCGCCAGCGAGGCTCTACCCTCACCCTGAC
TCACCCTTCTCCGGGGACCAACTTCGCAAGCAGGTCGTCTCCTTTGAGAAGGTCAAACTC
ACGAACAACGAAATGGACAAAAATGGACAGCTGGTCCTTAATTCAATGCATAAGTATCAA
CCCCGAATCCATCTGGTATTGCGAAGAGAAGGAGCTATCAACGCACCGATCACAGACCTT
GAGCAAGAGGAGTTTAAGACGTTCATATTTCCTGAATGCGTCTTCACCGCAGTCACGGCC
TACCAGAACCAACTTATAACCAAACTTAAAATCGACAGTAATCCGTTCGCAAAGGGATTC
CGCGATTCTTCACGTCTGACGGAATTTGAGAGATTCTATATCACGGGGGAGCACGAAAGA
ACATCAGTCTTCCCCGATGACGCGCGCCTCGGTGCCGCCCATCCTAGAGAGACGATGGAG
TCGATGCTGGCTGAGCAGCATTATTTACGGTCACCTCTTAGACCGTTCGATCTGGATCAG
CACAACAACAATCTGACGCTGGAAGAGAAAGCGATTTTGGCGGCCAGGTCACAGTTGTTC
TTGCGAGCAGCGTATCCTCTGTACGGTGTACCAGCAGCAGCGTTGTGGGGTCAATGGGCG
TGTCTGGCGCCACAATTACTGGCACAACAGCATCTAGCTTCAGGGTCTGGGCTACAGTTG
CCTCGGCCAGTATACCCGGGTGGTGTGCCAGCATCACTCTCGCAGCATCGCTTCTCCCCC
TACCCCGCCCGCCGTTCCTCACCGGGTTCCTCACCAGACTCCCTCCGCGCGAGTCCCCAC
TCCTTGCCCCCGCCCGCACCGCACACACCTCACGCACCCCACAGCCCGACCTAG
Protein sequence:
MFPTVRVSFAGCRAEARYAVLLDVVPVDGKRYRYAYHRSSWLVAGKADPPAPARLYPHPD
SPFSGDQLRKQVVSFEKVKLTNNEMDKNGQLVLNSMHKYQPRIHLVLRREGAINAPITDL
EQEEFKTFIFPECVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTEFERFYITGEHER
TSVFPDDARLGAAHPRETMESMLAEQHYLRSPLRPFDLDQHNNNLTLEEKAILAARSQLF
LRAAYPLYGVPAAALWGQWACLAPQLLAQQHLASGSGLQLPRPVYPGGVPASLSQHRFSP
YPARRSSPGSSPDSLRASPHSLPPPAPHTPHAPHSPT