| New model in OGS2.0 | DPOGS211118 |
|---|---|
| Genomic Position | scaffold52:+ 174003-175289 |
| See gene structure | |
| CDS Length | 1287 |
| Paired RNAseq reads | 9 |
| Single RNAseq reads | 25 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002996 (5e-157) |
| Best Drosophila hit | touch insensitive larva B (9e-81) |
| Best Human hit | leucine-rich repeat-containing protein 6 (8e-71) |
| Best NR hit (blastp) | AGAP008927-PA [Anopheles gambiae str. PEST] (1e-98) |
| Best NR hit (blastx) | PREDICTED: similar to testis specific leucine rich repeat protein [Tribolium castaneum] (5e-88) |
| GeneOntology terms | GO:0007605 sensory perception of sound GO:0045433 male courtship behavior, veined wing generated song production GO:0050910 detection of mechanical stimulus involved in sensory perception of sound GO:0010378 temperature compensation of the circadian clock |
| InterPro families | IPR007052 CS-like domain IPR001611 Leucine-rich repeat |
| Orthology group | MCL14880 |
Nucleotide sequence:
ATGGTTCTAATAACGGTAGAACTGGTGAGAAATAAGGCTGAACATCACGATCGACTGCTG
GCTCCTCTAGAAGAAATAGCCTTACATCAGGAAAATATAGAAAAAATCGAACACATACAG
GACTGGTGTCCGAAGCTCAAGATACTTTTAATGCAAAGCAATTTAATAAGTAAAATAGAA
AATTTAAACAGGTTAAAACACCTCACTTACCTAAATTTAGCACTTAATAATATTGAAATT
ATAGAAAATTTGGAAAGATGTGAATCGCTACAGAAATTAGATCTGACACTCAACTTTATT
GGGCATATTATTTCTATTGAATCCCTTGTTGGTAACTATAACTTAGAGAACCTATATTTA
ACTGGAAACCCGTGCACGGATTATGATAATTATCGTGAGTTTGTTGTCGGGACTCTTCCT
CAACTCATGATACTCGACGGAAAAGAGATTGAAAGATCGGATCGCATCAAAGCATTACAA
AACCTAAGGATCATTAGATCCGACATACTTTTTGAACAAAACAACTATCTATGTCAAAGG
AAATCACAAAAGGTACGTCTCGAGAAAAACATAGCAGCAAAATGGGAAAATGAATACAAA
AATATGGATCCTGATGAAAGGAATAAAAAATTTTGGGCTGAAAAATGTGAGCATGCACCT
GAAGTTAGATACGAAATGGAACGGATGCGCCAACTTAAGCTAAAAAGCCTTGCGCCTGAT
GAAAAAAAAGAGGAAAAACGTGAATATAAATTTTTCACAACAGATGGCAGGCCATTTAAT
ATAAACCAAGCAAGGATAGATTTTAAGTTTAGTGATACTGAGCCGGATAAGTACGTATTA
GACTTGGCCATTTACAAACATTTAGACACCAGTTTATTAAACATAGATGTCCAGCCGAAC
TATGTGAGAGTTACACTAAAAGGAAAAATATTCCAACTCCACCTTCCGGAAGAAGTTAAC
ACATCCGAATCTAAAGCTCAGAGGTCGCAGGTCACAGGTCATCTTATTGTAACTATGCCC
AAAGCGAATATCGTCATTAAAGAGCATAAATCTCCAAAAGTAATGAATCGTGACGAAAAA
TCCAGAAGAAATGACAAACTGCCCGAATATAAAGGGTCAGGGCAGTCTAAAAGAGAGTAT
TTAGAAATCGGACCCTCTGATAATACTCTGGACTTCAGAAACATGATTACAAAGAAACCC
GATTTCATTGATCCCAGAATGTCTTTAAAAGGGAAACAGCCGTCAGAAGGTTTTATAGAC
GATCCGCAGGTTCCAGGTCTTATTTAA
Protein sequence:
MVLITVELVRNKAEHHDRLLAPLEEIALHQENIEKIEHIQDWCPKLKILLMQSNLISKIE
NLNRLKHLTYLNLALNNIEIIENLERCESLQKLDLTLNFIGHIISIESLVGNYNLENLYL
TGNPCTDYDNYREFVVGTLPQLMILDGKEIERSDRIKALQNLRIIRSDILFEQNNYLCQR
KSQKVRLEKNIAAKWENEYKNMDPDERNKKFWAEKCEHAPEVRYEMERMRQLKLKSLAPD
EKKEEKREYKFFTTDGRPFNINQARIDFKFSDTEPDKYVLDLAIYKHLDTSLLNIDVQPN
YVRVTLKGKIFQLHLPEEVNTSESKAQRSQVTGHLIVTMPKANIVIKEHKSPKVMNRDEK
SRRNDKLPEYKGSGQSKREYLEIGPSDNTLDFRNMITKKPDFIDPRMSLKGKQPSEGFID
DPQVPGLI