| New model in OGS2.0 | DPOGS211122 |
|---|---|
| Genomic Position | scaffold52:+ 225106-229387 |
| See gene structure | |
| CDS Length | 2850 |
| Paired RNAseq reads | 440 |
| Single RNAseq reads | 1100 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002998 (4e-74) |
| Best Drosophila hit | transport and golgi organization 6 (2e-12) |
| Best Human hit | transmembrane and coiled-coil domain-containing protein 7 (6e-20) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC014300 [Tribolium castaneum] (3e-71) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC014300 [Tribolium castaneum] (5e-74) |
| GeneOntology terms | GO:0005488 binding |
| InterPro families | IPR011989 Armadillo-like helical IPR016024 Armadillo-type fold |
| Orthology group | MCL18002 |
Nucleotide sequence:
ATGTCCGACGTTAATTGTATATTTAAGCAAATAGAAAAGATTCTGAAAATTGACACAAAC
ACCGAGTTCATGGTTGCGGTTTTCAATGAAATCATCAAGTGTAATAGCAGCTTGAACGAA
AATGATATATTTGACGTTTTAAGGACATTTCTAAACAACATAATCAAAGAAATCGATGAA
CTTGGTACTATCATCAAAAACAACGATGGTGTCAGTATCAGTGTCAAAAATCAAAAAATG
TTGCGTACCTGTTATCAAATAATTACCTCGTTTGGTATATCATCATGTTTATTGCCTGGT
TTAGGAATCAGCCTGTCTAAGAGGTGTGCCACTGCGAAGTCACTGCCAACATTATCACTT
AAAGATACAGAGAAATATGAACTACTAGTTTGGTGTACAGATTTCTTGTCCAGAAGTTAT
GAAGTACCAGTACTTAAAAATATTATATTAACTTTTCATTTGTCCGATTATCTGGCAGCA
CTTATACAATTAGCCTTTGCCCCTTTGAAGAAACCTGGAGATTATTCAAATTTCACTATG
ACTCAAGAGATGTACGACAAGTTATTGTTTGATAAGCAGAAATATATAAAAACTTATGAG
TACTTAGTGAATAATTGCTTCCAGCCAATGTTAATGAAGGAACTTTTAGTATTACAGAAT
ATAACAGAGCACCCACCTCCAATGTTTGCTAAGAAAGTTATTTCAAAGGAAATGAGTAAG
CGTCTCACAACTTGGGGTGGGTTACTCAGCCTGATTAGATGTTTCATCGAAAGCCACGAG
GTCGACGTCGGTGTCGAGTGGAAGAAAATAGAAATGATCTGTAAAATAGTTACTTGTCGG
CACTTGAACTTGAGTGAAGAGGACTATTTGAGTAACATTGTCTCGCAGTTAAGGCATATA
TACACTATGAATAATAAACATTACTTGATAACAGCATCTTCGTGCTTGTTAAGCCTATAT
ACAAAATACAATAAATCCACATCAGTGATAAATTTGCTCAATGAAGTCTTTGGTAGTTTT
GATCATGAAGCCTTATTGGCCGATGCTTTACCGGGAACTATTATATTGGTGTCACAGCAA
GTCCAACACAACATACAGATCCTTCAGGCATGTACAGCTATAACGCAATATGAGCTACCA
ATACAAATGTCCAAGAACTTGTATGTGCTGTATCTCTTAAGGCTCAACTGTACAAAAACT
GAAATGAAGCTCAAATTAAATGACATTATACTCAAAATTATGGAGTTGTTAAATAAAAGT
GAGATAAAAATTGTAATTGAACAAATTCTTTTTGGACTGAACAATCACAATTCTCATAAA
ATCATAGCTAAAGAATACGAGTCCGGTCTTTCAGTGAAATGTGTAACAGCGGACTTTGAA
TATCCCAGCGACGAGGCAGTTATATATTTTATAGAAATGTTTAATTTAATAACGAACAAT
GATGTCGTTTGTAACATATTCGAAGCGTGCTTATTAAAATTTATTGAATTGAATAAAGAA
AACGAAACATGCGATAAAGAGGCTTTTCTGTTGGTCGAAGATGAGCCTGAGGTGCTTAAC
TCGGTTAGCAAAAAGTGTGCTCATATGCTTCATATCCTATCCGAAATATCAGCAACCGAG
AAGGTTATAACCATTTTGAAAGACAAACCACTTCTTGTGCTAGATTTCGTTGAATCATTA
TTACTAAATAATATAAACCCAATAAATGATGAGTGTTGTACTATTGCTCTTGTTCTTCTC
AATACTATTGTAGCTAACATTGAGAAAACCGAGGACATACAAACAAGACTTAATGGCCTG
ATGCCGAGACTGAAACAATTGTCAGGGGAAAATTCTTCGTATGTAAATGTTTTGTCCAAG
GAAACGTTGTCTTTGATCGAAATGGAATGTCCAAAAGCTGATAAAAGTGCTTACGAAAAA
GCAGTGTCCAATATTTATGACAAGTTACTGCCAGTGCGAGTTCATGGGGTCATTGAACTC
ACTAAACTAATCGACAGATCAGATGTGGAGACCATTTCTAAGAGACATTTCATATTTTGT
CTCTTCCAGGAACAACTCAGACATCCCGATTCCTATATGTATCTAGCATCAGTGAACGGT
ATAGCCTCGCTAGCTATGCACTGCACCGCTGAAGCGTTGTCTATACTTTGTAAAGAATAT
TTAGAAGAACAACTCAGACATCCCGATTCCTATATGTATCTAGCATCAGTGAACGGTATA
GCCTCGCTAGCTATGCACTGCACCGCTGAAGCGTTGTCTATACTTTGTAGAGAATATTTA
GAAGTTTCTCCGGATATCAGAAATAATGAGAGTGAAAACCAAAACGCAGAACTCAGAATG
AAAATAGGAGATGTTATAGTTAAAGTTACGAGGAGACTAGGCGAAATGGCGGTAGTTCAT
AAAACGATTTTACTTAACACGATGCTGTGCGCCTGCAAGGATGATGACCCGCTGATAAGA
ACGTCGGCTCTATCGAATCTAGCAGAAATAGCATTGGTTTTGAATTACAAAATCGGTTCT
ATTTTATACGAATTATTGCTATGTGTTTGGGACGTTATAAATGGGGATCCGGCGTTGGAA
TGTCGGAGAGCAGCTGTGATGGTTTTGGCCAACCTAATCAAGGGTCTTGGCAAAGATACC
TTAGTAGAACTAAACGATACTCTACTACCCATCTATAAGACTCTCCTCAAACTCTACAAA
GATGATGACGAGGATTCGTTAGTTAGGCTCCACTCGCAAATCGCTCTAGAGGAACTAAAT
GACATCGTCAAAGGATTCCTCACACAATGTCTTCCGTACGAAAAAGAAATTTCACTAACA
ACGACCCCCAATAATATAATTTTCAAATAA
Protein sequence:
MSDVNCIFKQIEKILKIDTNTEFMVAVFNEIIKCNSSLNENDIFDVLRTFLNNIIKEIDE
LGTIIKNNDGVSISVKNQKMLRTCYQIITSFGISSCLLPGLGISLSKRCATAKSLPTLSL
KDTEKYELLVWCTDFLSRSYEVPVLKNIILTFHLSDYLAALIQLAFAPLKKPGDYSNFTM
TQEMYDKLLFDKQKYIKTYEYLVNNCFQPMLMKELLVLQNITEHPPPMFAKKVISKEMSK
RLTTWGGLLSLIRCFIESHEVDVGVEWKKIEMICKIVTCRHLNLSEEDYLSNIVSQLRHI
YTMNNKHYLITASSCLLSLYTKYNKSTSVINLLNEVFGSFDHEALLADALPGTIILVSQQ
VQHNIQILQACTAITQYELPIQMSKNLYVLYLLRLNCTKTEMKLKLNDIILKIMELLNKS
EIKIVIEQILFGLNNHNSHKIIAKEYESGLSVKCVTADFEYPSDEAVIYFIEMFNLITNN
DVVCNIFEACLLKFIELNKENETCDKEAFLLVEDEPEVLNSVSKKCAHMLHILSEISATE
KVITILKDKPLLVLDFVESLLLNNINPINDECCTIALVLLNTIVANIEKTEDIQTRLNGL
MPRLKQLSGENSSYVNVLSKETLSLIEMECPKADKSAYEKAVSNIYDKLLPVRVHGVIEL
TKLIDRSDVETISKRHFIFCLFQEQLRHPDSYMYLASVNGIASLAMHCTAEALSILCKEY
LEEQLRHPDSYMYLASVNGIASLAMHCTAEALSILCREYLEVSPDIRNNESENQNAELRM
KIGDVIVKVTRRLGEMAVVHKTILLNTMLCACKDDDPLIRTSALSNLAEIALVLNYKIGS
ILYELLLCVWDVINGDPALECRRAAVMVLANLIKGLGKDTLVELNDTLLPIYKTLLKLYK
DDDEDSLVRLHSQIALEELNDIVKGFLTQCLPYEKEISLTTTPNNIIFK