| New model in OGS2.0 | DPOGS214218 |
|---|---|
| Genomic Position | scaffold323:- 128548-133397 |
| See gene structure | |
| CDS Length | 2307 |
| Paired RNAseq reads | 2055 |
| Single RNAseq reads | 5088 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG2818, isoform A (2e-170) |
| Best Human hit | putative glycerophosphocholine phosphodiesterase GPCPD1 (4e-94) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0008889 glycerophosphodiester phosphodiesterase activity GO:0006071 glycerol metabolic process GO:0006629 lipid metabolic process GO:0004629 phospholipase C activity GO:0023034 intracellular signaling pathway GO:0030246 carbohydrate binding |
| InterPro families | IPR013783 Immunoglobulin-like fold IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain IPR002044 Glycoside hydrolase, carbohydrate-binding IPR004129 Glycerophosphoryl diester phosphodiesterase IPR013784 Carbohydrate-binding-like fold |
| Orthology group | MCL15799 |
Nucleotide sequence:
ATGCAACGCTGGTTTTTCTTGAAAGAAACTAAGAAGTTGCCACAAAAAATATCTAAAAAA
ATGTCGACGAAACAAATTACTCAAGAAAAGGAAATTGAATCACAAGAATGGGTGTTCACT
GTGTCTGTGCCAGAAATTGCTCCGAGGGAAAAAGTTTATTTAACGGGAAGTACAACTGAA
CTTGGCGAATGGGATTACAAAAAAGCCGTCCCTCTCGAAAATGTAGAAAACACTGATATG
TGGACTAAAACAGTAATTATACCAAATACTTGTGATGTATACTATCGCTATGCTATTTGT
CTTGTTAATATTGACACAAATGATATCATAGTGCGCCGCTGGGAAACTCACATACACCCA
AGAGTTATAAAGGAAACAATGCTTCATCCTCATACTGATATATTTGGTAATAATGAAGGG
ATATACAAGGTTAATAAAGGCTGGCTTACCTTTCAAACATTAGTCCAGTTTAAATTTATG
CACAACCCTTTAAAGTTAAAAAGTCGCTTAACTGGCCGCCTCATGAATATTAAAGTAACA
CCTGTTAAGCTATCTTTTGGAGCTGAGCCACAAATTGAAGAATCCTCCTTAAGTACAGAC
ACAATGGAAGCAGAAGTTCCTTGTGGGGTTTTTGTGGAAGTAGCTACTCTTGAAAATGAT
CCTATGGTTTGTCACCTACAACCTCAAGAACAATTTGGAAGAGAATACAAGCCGAATGAT
GTATTACTAGTTAATTTGTTTGCCCCAAATCCTAAAGGCCTAGCATATCTTATAGATTTT
TATTCATACAGTACTAGGGCTTCTGTAGAAGATCCCCCTTGTCATGTTGGTTACACTTAT
GTGTTACCTAACATGTTTAAGCCATCTGAGGGCTCATTAGAATTACCAGTTACTTGTAAT
GTGAAACATCGGCCATTAGGCACTATTAATTTTGAATACCTTATAATTTCTCCAATGGAA
GATGGTTTGTGTAATTTAGAAGTTTCCTATACAAAACACTGGGATCCTTCATGGACTGGA
TTGGAAGTTGGTCACAGAGGTTTAGGTGCCAGTTTCAAAACCAAAGAGGGAAATGCCATT
CGTGAAAATACTATAGCTTCTCTTAAAAAAGCAGCTGCCAGTGGGGCAGACATGCTGGAA
TTTGATGTGCAACTAAGTAAAGACATGATACCTGTTATTTATCATGACTTTCATGTGTGT
ATTTCTATGAAAAGAAAAAAGGAAGTTGACTTCACTGAAATGCTTGAATTGCCAGTGAAA
GACTTAACCCTGGAGCATCTGCAGAAATTGAAGGTTTATCATTTAGTAGAAGGACGAAAT
CACGAAATTCTTTTCTTCGATGAAGATCTTGAGGAGCATCAGCCATTTCCAACTCTTGAA
GAAGCCCTAAAGAGTTTAGATGAGCATGTTGGCTTCAACATTGAACTTAAATGGACCATG
GAACTCAATGATGGCACATTTGAATTGAACAACCCATTTGATATGAACACATATGTAGAT
AAGGTTTTGGAGGTGGTACTAAAACATGCTGGACAAAGAAGAATTGTACTTTCCTGTTTT
AATCCTGATATATGTACAATGGTCCGTTACAAACAAAACAAATATCCTGTAATGTTTCTC
ACAGTGGGAGTAACAGAGAAATACCAGCCTTATCGCGACCCACGTTGTCTATCCATACCT
GCTGCAGTACAGAATGCTATCAGCTCTGACATTCTTGGCATTGTGGTACACACAGAGGAT
TTACTTAGAGATCCCACACAGGTCAAATTAGCCACCGACGCCGGTCTAGTCATATTCTGT
TGGGGCGATGAAAATAATGACAAAAATACTATAAAGAAACTCAAAGAAATGGGTTTGCAT
GCTGTGATATATGATAAACTGGACCAGTACACCACCAAAGAAGTTAAGGAAAGTATATTC
CTGGTGGAGGCGCGCGATTCGCAGCGTGATATCATGAGGTTGGCTGCATTGGACGCGTTG
CCAACCGATAGCACGTCGAGCCGTTCCCGCTCCCCCTCTCGCCAGTTGTCGTCGGCTCAA
TTCTCCGGGGACGGACAGCTCTATCTAGATCTAAAAGCACGCCAAAAAGCGACCCGCTCA
ACTGTCACGTCGCTGGAATCCCTCGCCTCGTCTATAGACATCCGCGACGAACCCGAACGT
AATCTTAAGCGCAACAAGGATCTCATTATGAGCATAGACAAGGAGTCCCAAATTAAAGAG
CAGAGGAATTCGTTTAAGGGCATCTTCCCCGCTCCCAATACGACTACGGCGTCGCCGAAA
AAATCCCGTAAAAGCGACTTATCTTGA
Protein sequence:
MQRWFFLKETKKLPQKISKKMSTKQITQEKEIESQEWVFTVSVPEIAPREKVYLTGSTTE
LGEWDYKKAVPLENVENTDMWTKTVIIPNTCDVYYRYAICLVNIDTNDIIVRRWETHIHP
RVIKETMLHPHTDIFGNNEGIYKVNKGWLTFQTLVQFKFMHNPLKLKSRLTGRLMNIKVT
PVKLSFGAEPQIEESSLSTDTMEAEVPCGVFVEVATLENDPMVCHLQPQEQFGREYKPND
VLLVNLFAPNPKGLAYLIDFYSYSTRASVEDPPCHVGYTYVLPNMFKPSEGSLELPVTCN
VKHRPLGTINFEYLIISPMEDGLCNLEVSYTKHWDPSWTGLEVGHRGLGASFKTKEGNAI
RENTIASLKKAAASGADMLEFDVQLSKDMIPVIYHDFHVCISMKRKKEVDFTEMLELPVK
DLTLEHLQKLKVYHLVEGRNHEILFFDEDLEEHQPFPTLEEALKSLDEHVGFNIELKWTM
ELNDGTFELNNPFDMNTYVDKVLEVVLKHAGQRRIVLSCFNPDICTMVRYKQNKYPVMFL
TVGVTEKYQPYRDPRCLSIPAAVQNAISSDILGIVVHTEDLLRDPTQVKLATDAGLVIFC
WGDENNDKNTIKKLKEMGLHAVIYDKLDQYTTKEVKESIFLVEARDSQRDIMRLAALDAL
PTDSTSSRSRSPSRQLSSAQFSGDGQLYLDLKARQKATRSTVTSLESLASSIDIRDEPER
NLKRNKDLIMSIDKESQIKEQRNSFKGIFPAPNTTTASPKKSRKSDLS