| New model in OGS2.0 | DPOGS214223 |
|---|---|
| Genomic Position | scaffold323:- 77356-83136 |
| See gene structure | |
| CDS Length | 816 |
| Paired RNAseq reads | 1098 |
| Single RNAseq reads | 3941 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005948 (3e-75) |
| Best Drosophila hit | CG6055 (4e-105) |
| Best Human hit | ND |
| Best NR hit (blastp) | C-type lectin 4 [Bombyx mori] (4e-118) |
| Best NR hit (blastx) | C-type lectin 4 [Bombyx mori] (7e-119) |
| GeneOntology terms | GO:0005488 binding |
| InterPro families | IPR018378 C-type lectin, conserved site IPR016186 C-type lectin-like IPR001304 C-type lectin IPR016187 C-type lectin fold |
| Orthology group | MCL16052 |
Nucleotide sequence:
ATGAATCTCGGAGGCTTAATTAGAGAGGACGCTTGCGCCTGCGCCAGTTCCTCTGAAACA
ACCGCGGTCGACACACGCTTCTTGCGTACAAACAGACGTACGCTCAGTTCTAACGCTCGC
AACAATCAGCTTCATTTTAAACTCCCAGAGATGAGCCGGCACGCTTGCTTGGCAGCAGCC
GCGCTGTTGGCGGTCCTCTGCGTCGCAGACGCCCAACGACGCCTGGCCTTACCTGACCCT
AGGAGTTGCGCTAACCGAGTTCGTCACTCTACGTACCGCGATGGACGCGGTGTATTGCAT
TCGTACTTCTTCAGTTGGGAACATGCTCCAACACGTAGTTTGGAAGTTGACTGGTTGGAT
GCCAGGAACATCTGCCGACGACACTGCATGGACGCCGTCTCTTTGGAAACTCCACAGGAG
AATGAGTTCATAAAGCAAAAAATAGCGAAAGGAAATGTTCGTTACATCTGGACATCGGGT
CGCAAGTGCAACTTTGCTGGCTGCGATCGCCCTGACCTTCAGCCACCTAATGTAAACGGC
TGGTTCTGGTCTGGCTCCGGTGCTAAGATCGGGCCAACTCAACAACGTAACACTGGTGAC
TGGTCCTACACGGGAGGATATGGACAAGCCCAACCCGATAATAGAGAAGCTGCACAAGGT
AATGACGAGTCCTGTTTGGCTATCCTGAACAACTTCTATAACGACGGTGTGAAGTGGCAC
GATGTCGCCTGTCATCACGTGAAGCCATTCGTGTGTGAAGACAGTGACGAGCTGATAAAC
TTCGTACGCTCTCGCAACCCTGGCCTTCGTCTTTGA
Protein sequence:
MNLGGLIREDACACASSSETTAVDTRFLRTNRRTLSSNARNNQLHFKLPEMSRHACLAAA
ALLAVLCVADAQRRLALPDPRSCANRVRHSTYRDGRGVLHSYFFSWEHAPTRSLEVDWLD
ARNICRRHCMDAVSLETPQENEFIKQKIAKGNVRYIWTSGRKCNFAGCDRPDLQPPNVNG
WFWSGSGAKIGPTQQRNTGDWSYTGGYGQAQPDNREAAQGNDESCLAILNNFYNDGVKWH
DVACHHVKPFVCEDSDELINFVRSRNPGLRL