New model in OGS2.0 | DPOGS214151  |
---|---|
Genomic Position | scaffold323:+ 112907-113685 |
See gene structure | |
CDS Length | 552 |
Paired RNAseq reads   | 233 |
Single RNAseq reads   | 717 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006198 (4e-70) |
Best Drosophila hit   | mitochondrial ribosomal protein S18B, isoform B (5e-51) |
Best Human hit | 28S ribosomal protein S18b, mitochondrial precursor (3e-28) |
Best NR hit (blastp)   | RPS18 [Trichoplusia ni] (5e-80) |
Best NR hit (blastx)   | RPS18 [Trichoplusia ni] (4e-79) |
GeneOntology terms    | GO:0006412 translation GO:0005763 mitochondrial small ribosomal subunit GO:0003735 structural constituent of ribosome |
InterPro families   | IPR001648 Ribosomal protein S18 |
Orthology group | MCL10608 |
Nucleotide sequence:
ATGTCACTCTTCAATAACATTCGTTCAGTTATTAATAGGGCAGTTTTATCAGATATAAGA
ATTGCAGTCCGTTATTATTCAGATCAAACCGATGAAAGCGAGGAACAACAGAAACCAATA
GATCCTACAAAAGACCGAACAAAAATTATTCCTATAGAAACTAGTATTAGATATTTGCAA
AGTGATGCATATAAAAAAACTTATGGAGACAAACCAGTATGGTTTTTATATAGACGCAAT
CACAAAGGAGGATTCGCACCCAGAAAGACTAGAAGAACATGTATTCGAAACGGTATAATA
TCGACAGGGAACCCCTGCCCTATTTGCCGCGACGAATACCTAATACTTGATCCTAAGAAT
GTATCGCTTCTGGAACAGTTCATATCAGAGTACACCGGACAGATCCTAGAGCCTTCTAAA
ACTGGTCTCTGTCAGAAAAAACATAAAGAGCTATTGGTTGCCATTGAACGAGCTTGGGAT
CAAGGATATATTACATATGATGTCCCTTTCAGGGAGTATGATTACAGTCTTTACAATACT
AATGTAAATTGA
Protein sequence:
MSLFNNIRSVINRAVLSDIRIAVRYYSDQTDESEEQQKPIDPTKDRTKIIPIETSIRYLQ
SDAYKKTYGDKPVWFLYRRNHKGGFAPRKTRRTCIRNGIISTGNPCPICRDEYLILDPKN
VSLLEQFISEYTGQILEPSKTGLCQKKHKELLVAIERAWDQGYITYDVPFREYDYSLYNT
NVN