| New model in OGS2.0 | DPOGS209887 |
|---|---|
| Genomic Position | scaffold82:- 94485-101025 |
| See gene structure | |
| CDS Length | 2088 |
| Paired RNAseq reads | 383 |
| Single RNAseq reads | 1121 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004209 (2e-149) |
| Best Drosophila hit | CG10621 (3e-32) |
| Best Human hit | translin-associated factor X-interacting protein 1 (6e-39) |
| Best NR hit (blastp) | PREDICTED: translin-associated factor X interacting protein 1 isoform 4 [Pan troglodytes] (1e-54) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_117631 [Branchiostoma floridae] (1e-49) |
| GeneOntology terms | GO:0030154 cell differentiation GO:0007275 multicellular organismal development GO:0005515 protein binding GO:0048471 perinuclear region of cytoplasm GO:0005737 cytoplasm GO:0007283 spermatogenesis |
| InterPro families | IPR003726 Homocysteine S-methyltransferase |
| Orthology group | MCL21865 |
Nucleotide sequence:
ATGGAGAAATGGCACAGACCCCGTATTGAGGCTTTAATAGATGCCGGTGTAGATATTTTA
GCTTTAGAAACAATGCCATGTGGAAAAGAAGCTGAAATGCTTGCAAGTATGATAAAAAAT
TATGCTCAGATACCAGCCTGGATAACATTCAGTTGTAAAGATGATAGAAGTCTAGTTGAC
GGAGAGGATTTTCAAACAGTGGCACAAAGATGCTGGGAAATAAATCCAGAACAACTCATT
GGTATTGGAGTGAATTGTTGCTCACCTAAGGTTGTTGGGAATCTTTTTAAAGACATCAGT
AAGGGGATAGAGCCACCACTGAGTTTGGTTACATATCCAAATTCGGGAGAAAAATACACA
GAGGAAGGGTGGGGGGAGAGAGACTGTGATTCATTGGACACATATGTGCATGATTGGTTG
GATCTTAATGTGAAGTTTGTGGGAGGTTGCTGCAGGACCTACGCAGAAGATATTGCCCAA
ATAAGAAAGAAAAAGGTATTCGGTATTTCAATGAGAAAAAAACAAACTGATAACAAGGTA
AAAATGTTGTTACAAGAGAACAATAACTTGAAGGAAGAGAATCTTAAGCTGTCCTTGAAA
ATCTCAAGGTTAAAAAGAGAAATCGGAAAGATTAAAGACGACAAGTTTTCGGACTATTTG
TGTCTGATGCGCGAGCGTGACGCTCGATATACTTTGTACTTCGAGAACGTGGCTCTTCAT
CTGAAGCTGAGAGAGTTGGACGGAACTTCCAGATGTTACTCGGTCGACGACTCCTATGGT
GATCCTGTCATACTTAAAATTGCCTTAGAAAAGTGTCGGGAACAGTTATCTGCTGCGCAA
AATAATTTGAAAAGAATGAAAGAAGAGTACTCAGAGACCATACCGAGACGGGAACATGAT
TTACTTGACGCTAAATGTTACGAACTCACCAAGGAAGTGAACACTTTGAAAACAGAATAC
GATATTGTGCAAAATTCATATAAACGAGTCTTAGCCCAGAAGAAGAGCCTGGAGGAGGAG
TTACGTGAGGTGAAGGAGCGATGTAGTGAGCTAGAGCGATCTGGTACTCCTCGTCCATGC
TGGGAACTGTGCGGAGACTTCATCAGTGGCGGCCGGGATCGATGGTGGCAGTTAGCAAAC
GGTTTATCATCGAGGGACATGCTGAGGGTTCTGTTAAAGGAACTCGGGCCTGCAGCCGAG
AGCGAACATCTAGAATACTTCGATGGTTTGGGAACCGACCCAGCGATCCCTCCATACCTC
CGTCATGAAGGTCGCGTCCGCAATCTTCGTCTTTCCCGGCGTGAGGTGCGAGTCCTCGTT
AACGACATCTGGATATCTCGCGCCACTCACAGAGATCTTCCTCTACAGGATTACGTCACA
CGATACTTTGAAGAGAGGTACCAACAGCCATCAGTTCGTGCCGAGTGGTCGTACAACATG
TGCGCGGGTCTCGAGCAGATGATGGACGAACCGAGCGTGAAGCTGTTCTGGGGCGCGCTG
CTCGGACAGCTCAGCGAGGACGTGTACTGGCGGCTGAGGGACGCCTGGCACACGCTCAGA
GACAGACTCTACACACACAACGGTGGACAGGAGACCCTAAGTATTGAGGAATTGGAGAAG
GTGACGCGGACGACCTTCCCCTTGAAGAATGAAGTTGACATAAAGAACTTGATGGAAGTC
GTCAAGAAACAACTCAAACTGAAGATAAACGTCGTTGAGGTGAACTTGGATAAATTGTTC
TTTGAGAATGAAGAAGGTTTCGACCGATCGGAACTAGCGCGGGAATTATACAGGCAGAGA
CAACTGGCCCAAGATAAATACATACGAGAAGTGATCGCTGAACTCGGGAGGAGGAACCTT
AACAAGACCATTAGTGTGGACTGTCTTAAACGAGCCTTCGCCATCGTCGACCCGGCCATA
GATCACATCCGTATGGAACGCTACATCCGCTGGGCCTTCTCAGACCAAAGTTCTGAACTA
TCAGCCATTTGTCCTTTGCCGCTACGCACTATCGTATCCAGACTCGCATCGGGAGACATA
GAACGTATTGGACCGAGACATAAAGGATTTCGTAGATCTTATAAATAA
Protein sequence:
MEKWHRPRIEALIDAGVDILALETMPCGKEAEMLASMIKNYAQIPAWITFSCKDDRSLVD
GEDFQTVAQRCWEINPEQLIGIGVNCCSPKVVGNLFKDISKGIEPPLSLVTYPNSGEKYT
EEGWGERDCDSLDTYVHDWLDLNVKFVGGCCRTYAEDIAQIRKKKVFGISMRKKQTDNKV
KMLLQENNNLKEENLKLSLKISRLKREIGKIKDDKFSDYLCLMRERDARYTLYFENVALH
LKLRELDGTSRCYSVDDSYGDPVILKIALEKCREQLSAAQNNLKRMKEEYSETIPRREHD
LLDAKCYELTKEVNTLKTEYDIVQNSYKRVLAQKKSLEEELREVKERCSELERSGTPRPC
WELCGDFISGGRDRWWQLANGLSSRDMLRVLLKELGPAAESEHLEYFDGLGTDPAIPPYL
RHEGRVRNLRLSRREVRVLVNDIWISRATHRDLPLQDYVTRYFEERYQQPSVRAEWSYNM
CAGLEQMMDEPSVKLFWGALLGQLSEDVYWRLRDAWHTLRDRLYTHNGGQETLSIEELEK
VTRTTFPLKNEVDIKNLMEVVKKQLKLKINVVEVNLDKLFFENEEGFDRSELARELYRQR
QLAQDKYIREVIAELGRRNLNKTISVDCLKRAFAIVDPAIDHIRMERYIRWAFSDQSSEL
SAICPLPLRTIVSRLASGDIERIGPRHKGFRRSYK